Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 HAL5YJL165C 2568 nt7.59□□□□□ -1.2
UPF3P48412 HSV2YGR223C 1347 nt7.58□□□□□ -1.2
UPF3P48412 RRT14YIL127C 621 nt7.58□□□□□ -1.2
UPF3P48412 PMT7YDR307W 1989 nt7.57□□□□□ -1.2
UPF3P48412 SLM3YDL033C 1254 nt7.57□□□□□ -1.2
UPF3P48412 PUP3YER094C 618 nt7.57□□□□□ -1.2
UPF3P48412 YJL160CYJL160C 864 nt7.57□□□□□ -1.2
UPF3P48412 RMA1YKL132C 1293 nt7.57□□□□□ -1.2
UPF3P48412 MRP7YNL005C 1116 nt7.57□□□□□ -1.2
UPF3P48412 RHO1YPR165W 630 nt7.57□□□□□ -1.2
UPF3P48412 ALG7YBR243C 1347 nt7.56□□□□□ -1.2
UPF3P48412 ARO3YDR035W 1113 nt7.56□□□□□ -1.2
UPF3P48412 YIA6YIL006W 1122 nt7.56□□□□□ -1.2
UPF3P48412 FRT1YOR324C 1809 nt7.56□□□□□ -1.2
UPF3P48412 NDE1YMR145C 1683 nt7.55□□□□□ -1.2
UPF3P48412 LSP1YPL004C 1026 nt7.55□□□□□ -1.2
UPF3P48412 YEL034C-AYEL034C-A 603 nt7.54□□□□□ -1.2
UPF3P48412 YER156CYER156C 1017 nt7.54□□□□□ -1.2
UPF3P48412 MET13YGL125W 1803 nt7.53□□□□□ -1.2
UPF3P48412 YHL030W-AYHL030W-A 462 nt7.53□□□□□ -1.2
UPF3P48412 YOR300WYOR300W 309 nt7.53□□□□□ -1.2
UPF3P48412 THI73YLR004C 1572 nt7.53□□□□□ -1.2
UPF3P48412 SHC1YER096W 1539 nt7.52□□□□□ -1.2
UPF3P48412 RCR1YBR005W 642 nt7.52□□□□□ -1.21
UPF3P48412 HXT8YJL214W 1710 nt7.52□□□□□ -1.21
UPF3P48412 PET18YCR020C 648 nt7.51□□□□□ -1.21
UPF3P48412 YPT31YER031C 672 nt7.5□□□□□ -1.21
UPF3P48412 RIB1YBL033C 1038 nt7.5□□□□□ -1.21
UPF3P48412 FCY1YPR062W 477 nt7.5□□□□□ -1.21
UPF3P48412 CCR4YAL021C 2514 nt7.5□□□□□ -1.21
UPF3P48412 PRE10YOR362C 867 nt7.48□□□□□ -1.21
UPF3P48412 TIM50YPL063W 1431 nt7.48□□□□□ -1.21
UPF3P48412 SNP1YIL061C 903 nt7.47□□□□□ -1.21
UPF3P48412 ELP6YMR312W 822 nt7.47□□□□□ -1.21
UPF3P48412 ATP2YJR121W 1536 nt7.47□□□□□ -1.21
UPF3P48412 PMT1YDL095W 2454 nt7.46□□□□□ -1.21
UPF3P48412 BXI1YNL305C 894 nt7.46□□□□□ -1.22
UPF3P48412 SGF73YGL066W 1974 nt7.46□□□□□ -1.22
UPF3P48412 CDA1YLR307W 906 nt7.45□□□□□ -1.22
UPF3P48412 YTH1YPR107C 627 nt7.45□□□□□ -1.22
UPF3P48412 BEM1YBR200W 1656 nt7.44□□□□□ -1.22
UPF3P48412 RSC9YML127W 1746 nt7.44□□□□□ -1.22
UPF3P48412 CKB1YGL019W 837 nt7.44□□□□□ -1.22
UPF3P48412 TES1YJR019C 1050 nt7.44□□□□□ -1.22
UPF3P48412 PMU1YKL128C 888 nt7.44□□□□□ -1.22
UPF3P48412 GGC1YDL198C 903 nt7.43□□□□□ -1.22
UPF3P48412 RRT6YGL146C 936 nt7.43□□□□□ -1.22
UPF3P48412 SOD2YHR008C 702 nt7.43□□□□□ -1.22
UPF3P48412 YHC3YJL059W 1227 nt7.43□□□□□ -1.22
UPF3P48412 ERG6YML008C 1152 nt7.43□□□□□ -1.22
UPF3P48412 TPO1YLL028W 1761 nt7.43□□□□□ -1.22
UPF3P48412 MTC6YHR151C 1581 nt7.42□□□□□ -1.22
UPF3P48412 MAK32YCR019W 1092 nt7.42□□□□□ -1.22
UPF3P48412 AFG2YLR397C 2343 nt7.42□□□□□ -1.22
UPF3P48412 JHD1YER051W 1479 nt7.42□□□□□ -1.22
UPF3P48412 YPL277CYPL277C 1464 nt7.42□□□□□ -1.22
UPF3P48412 DPH5YLR172C 903 nt7.41□□□□□ -1.22
UPF3P48412 RPS6AYPL090C 711 nt7.41□□□□□ -1.22
UPF3P48412 YPL264CYPL264C 1062 nt7.41□□□□□ -1.22
UPF3P48412 RPS6BYBR181C 711 nt7.41□□□□□ -1.22
UPF3P48412 ARG7YMR062C 1326 nt7.41□□□□□ -1.22
UPF3P48412 CIT3YPR001W 1461 nt7.41□□□□□ -1.22
UPF3P48412 DAL7YIR031C 1665 nt7.41□□□□□ -1.22
UPF3P48412 SNU71YGR013W 1863 nt7.41□□□□□ -1.22
UPF3P48412 AVL9YLR114C 2295 nt7.4□□□□□ -1.22
UPF3P48412 ADA2YDR448W 1305 nt7.4□□□□□ -1.22
UPF3P48412 PDC5YLR134W 1692 nt7.4□□□□□ -1.23
UPF3P48412 PEX28YHR150W 1740 nt7.4□□□□□ -1.23
UPF3P48412 CTF3YLR381W 2202 nt7.4□□□□□ -1.23
UPF3P48412 GFA1YKL104C 2154 nt7.39□□□□□ -1.23
UPF3P48412 UTR5YEL035C 501 nt7.39□□□□□ -1.23
UPF3P48412 YER152W-AYER152W-A 567 nt7.39□□□□□ -1.23
UPF3P48412 AIM34YMR003W 597 nt7.39□□□□□ -1.23
UPF3P48412 YEN1YER041W 2280 nt7.39□□□□□ -1.23
UPF3P48412 HXT9YJL219W 1704 nt7.38□□□□□ -1.23
UPF3P48412 YPR084WYPR084W 1371 nt7.38□□□□□ -1.23
UPF3P48412 FHN1YGR131W 525 nt7.38□□□□□ -1.23
UPF3P48412 PUS5YLR165C 765 nt7.38□□□□□ -1.23
UPF3P48412 MFT1YML062C 1179 nt7.38□□□□□ -1.23
UPF3P48412 RUP1YOR138C 2016 nt7.38□□□□□ -1.23
UPF3P48412 YMR206WYMR206W 942 nt7.37□□□□□ -1.23
UPF3P48412 PRC1YMR297W 1599 nt7.37□□□□□ -1.23
UPF3P48412 ITR1YDR497C 1755 nt7.36□□□□□ -1.23
UPF3P48412 CDC16YKL022C 2523 nt7.36□□□□□ -1.23
UPF3P48412 BIM1YER016W 1035 nt7.36□□□□□ -1.23
UPF3P48412 MNN9YPL050C 1188 nt7.36□□□□□ -1.23
UPF3P48412 AOS1YPR180W 1044 nt7.36□□□□□ -1.23
UPF3P48412 YER152CYER152C 1332 nt7.35□□□□□ -1.23
UPF3P48412 KDX1YKL161C 1302 nt7.35□□□□□ -1.23
UPF3P48412 SHO1YER118C 1104 nt7.35□□□□□ -1.23
UPF3P48412 YIL108WYIL108W 2091 nt7.35□□□□□ -1.23
UPF3P48412 EHD3YDR036C 1503 nt7.34□□□□□ -1.23
UPF3P48412 MRP1YDR347W 966 nt7.34□□□□□ -1.23
UPF3P48412 DST1YGL043W 930 nt7.34□□□□□ -1.23
UPF3P48412 CPR2YHR057C 618 nt7.34□□□□□ -1.23
UPF3P48412 HAM1YJR069C 594 nt7.34□□□□□ -1.23
UPF3P48412 PAU21YOR394W 495 nt7.34□□□□□ -1.23
UPF3P48412 PAU22YPL282C 495 nt7.34□□□□□ -1.23
UPF3P48412 GDH1YOR375C 1365 nt7.33□□□□□ -1.24
UPF3P48412 TOP3YLR234W 1971 nt7.33□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 126.3 ms