Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
CCT6AP40227 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CCT6AP40227 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CCT6AP40227 DRD5P2-201ENST00000421395 2012 ntBASIC28.68■■■□□ 2.18
CCT6AP40227 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
CCT6AP40227 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.68■■■□□ 2.18
CCT6AP40227 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CCT6AP40227 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
CCT6AP40227 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.66■■■□□ 2.18
CCT6AP40227 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CCT6AP40227 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CCT6AP40227 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCT6AP40227 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CCT6AP40227 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CCT6AP40227 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.64■■■□□ 2.18
CCT6AP40227 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CCT6AP40227 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CCT6AP40227 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
CCT6AP40227 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.63■■■□□ 2.17
CCT6AP40227 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.63■■■□□ 2.17
CCT6AP40227 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.63■■■□□ 2.17
CCT6AP40227 DUX4L11-201ENST00000611504 1267 ntBASIC28.63■■■□□ 2.17
CCT6AP40227 DUX4L12-201ENST00000614593 1267 ntBASIC28.63■■■□□ 2.17
CCT6AP40227 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.63■■■□□ 2.17
CCT6AP40227 DUX4L14-201ENST00000621227 1267 ntBASIC28.63■■■□□ 2.17
CCT6AP40227 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCT6AP40227 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCT6AP40227 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
CCT6AP40227 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CCT6AP40227 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CCT6AP40227 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.6■■■□□ 2.17
CCT6AP40227 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.6■■■□□ 2.17
CCT6AP40227 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.59■■■□□ 2.17
CCT6AP40227 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CCT6AP40227 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCT6AP40227 MIR7108-201ENST00000614319 87 ntBASIC28.58■■■□□ 2.17
CCT6AP40227 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCT6AP40227 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CCT6AP40227 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.58■■■□□ 2.16
CCT6AP40227 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CCT6AP40227 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CCT6AP40227 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CCT6AP40227 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
CCT6AP40227 DUX4L13-201ENST00000554103 1267 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 DUX4L15-201ENST00000611059 1267 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 DUX4L23-201ENST00000615195 1269 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 DUX4L24-201ENST00000617576 1269 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 DUX4L22-201ENST00000618238 1269 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 DUX4L20-201ENST00000619712 1269 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 DUX4L21-201ENST00000622058 1269 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 DUX4L10-201ENST00000622460 1267 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 DUX4L25-201ENST00000624915 1269 ntBASIC28.56■■■□□ 2.16
CCT6AP40227 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCT6AP40227 AC110285.7-201ENST00000624417 1536 ntBASIC28.55■■■□□ 2.16
CCT6AP40227 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCT6AP40227 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.55■■■□□ 2.16
CCT6AP40227 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CCT6AP40227 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
CCT6AP40227 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.54■■■□□ 2.16
CCT6AP40227 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCT6AP40227 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CCT6AP40227 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.53■■■□□ 2.16
CCT6AP40227 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CCT6AP40227 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
CCT6AP40227 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCT6AP40227 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
CCT6AP40227 AP002414.2-202ENST00000590929 1450 ntBASIC28.52■■■□□ 2.16
CCT6AP40227 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CCT6AP40227 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.51■■■□□ 2.15
CCT6AP40227 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.51■■■□□ 2.15
CCT6AP40227 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CCT6AP40227 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CCT6AP40227 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CCT6AP40227 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CCT6AP40227 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.49■■■□□ 2.15
CCT6AP40227 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.49■■■□□ 2.15
CCT6AP40227 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.49■■■□□ 2.15
CCT6AP40227 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CCT6AP40227 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CCT6AP40227 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CCT6AP40227 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.47■■■□□ 2.15
CCT6AP40227 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
CCT6AP40227 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.47■■■□□ 2.15
CCT6AP40227 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CCT6AP40227 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.46■■■□□ 2.15
CCT6AP40227 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CCT6AP40227 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.46■■■□□ 2.15
CCT6AP40227 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CCT6AP40227 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.45■■■□□ 2.14
CCT6AP40227 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.45■■■□□ 2.14
CCT6AP40227 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.45■■■□□ 2.14
CCT6AP40227 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
CCT6AP40227 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
CCT6AP40227 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CCT6AP40227 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CCT6AP40227 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.44■■■□□ 2.14
CCT6AP40227 CR559946.2-201ENST00000623684 991 ntBASIC28.44■■■□□ 2.14
CCT6AP40227 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CCT6AP40227 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
CCT6AP40227 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms