Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL1A2P08123 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
COL1A2P08123 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL1A2P08123 GPX1-201ENST00000419349 1106 ntBASIC28.29■■■□□ 2.12
COL1A2P08123 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.28■■■□□ 2.12
COL1A2P08123 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
COL1A2P08123 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
COL1A2P08123 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.28■■■□□ 2.12
COL1A2P08123 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.28■■■□□ 2.12
COL1A2P08123 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL1A2P08123 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.27■■■□□ 2.12
COL1A2P08123 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.27■■■□□ 2.12
COL1A2P08123 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL1A2P08123 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.27■■■□□ 2.12
COL1A2P08123 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL1A2P08123 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
COL1A2P08123 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.26■■■□□ 2.11
COL1A2P08123 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
COL1A2P08123 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL1A2P08123 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL1A2P08123 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL1A2P08123 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL1A2P08123 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
COL1A2P08123 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.22■■■□□ 2.11
COL1A2P08123 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.21■■■□□ 2.11
COL1A2P08123 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.21■■■□□ 2.11
COL1A2P08123 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL1A2P08123 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL1A2P08123 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL1A2P08123 RARRES2P2-201ENST00000394842 485 ntBASIC28.21■■■□□ 2.11
COL1A2P08123 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL1A2P08123 MIR219A2-201ENST00000608502 1504 ntBASIC28.2■■■□□ 2.11
COL1A2P08123 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.2■■■□□ 2.11
COL1A2P08123 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.2■■■□□ 2.11
COL1A2P08123 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.2■■■□□ 2.1
COL1A2P08123 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.19■■■□□ 2.1
COL1A2P08123 RNF126P1-201ENST00000567452 1320 ntBASIC28.19■■■□□ 2.1
COL1A2P08123 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.19■■■□□ 2.1
COL1A2P08123 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL1A2P08123 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL1A2P08123 AC100797.4-201ENST00000631653 1827 ntBASIC28.18■■■□□ 2.1
COL1A2P08123 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.18■■■□□ 2.1
COL1A2P08123 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.18■■■□□ 2.1
COL1A2P08123 AC022413.1-201ENST00000624602 984 ntBASIC28.18■■■□□ 2.1
COL1A2P08123 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.18■■■□□ 2.1
COL1A2P08123 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL1A2P08123 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.17■■■□□ 2.1
COL1A2P08123 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL1A2P08123 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL1A2P08123 AL139393.2-201ENST00000608721 2025 ntBASIC28.16■■■□□ 2.1
COL1A2P08123 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
COL1A2P08123 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
COL1A2P08123 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL1A2P08123 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
COL1A2P08123 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL1A2P08123 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.15■■■□□ 2.1
COL1A2P08123 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
COL1A2P08123 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL1A2P08123 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
COL1A2P08123 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL1A2P08123 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.13■■■□□ 2.09
COL1A2P08123 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.13■■■□□ 2.09
COL1A2P08123 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
COL1A2P08123 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.12■■■□□ 2.09
COL1A2P08123 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
COL1A2P08123 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
COL1A2P08123 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
COL1A2P08123 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL1A2P08123 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.11■■■□□ 2.09
COL1A2P08123 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.11■■■□□ 2.09
COL1A2P08123 AC060814.1-201ENST00000554326 538 ntBASIC28.11■■■□□ 2.09
COL1A2P08123 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.1■■■□□ 2.09
COL1A2P08123 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.1■■■□□ 2.09
COL1A2P08123 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL1A2P08123 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
COL1A2P08123 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
COL1A2P08123 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
COL1A2P08123 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
COL1A2P08123 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.09■■■□□ 2.09
COL1A2P08123 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL1A2P08123 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.08■■■□□ 2.09
COL1A2P08123 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.08■■■□□ 2.09
COL1A2P08123 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL1A2P08123 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL1A2P08123 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
COL1A2P08123 ABHD17AP5-201ENST00000580133 923 ntBASIC28.07■■■□□ 2.08
COL1A2P08123 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
COL1A2P08123 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
COL1A2P08123 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.06■■■□□ 2.08
COL1A2P08123 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL1A2P08123 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
COL1A2P08123 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COL1A2P08123 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
COL1A2P08123 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
COL1A2P08123 ABCB10P3-201ENST00000561950 2166 ntBASIC28.02■■■□□ 2.08
COL1A2P08123 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
COL1A2P08123 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
COL1A2P08123 AC126177.7-201ENST00000547904 679 ntBASIC28.01■■■□□ 2.07
COL1A2P08123 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.01■■■□□ 2.07
COL1A2P08123 ABCB10P1-201ENST00000614297 2181 ntBASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms