Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRUB2O95900 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.73■■□□□ 1.87
TRUB2O95900 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.73■■□□□ 1.87
TRUB2O95900 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.72■■□□□ 1.87
TRUB2O95900 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.72■■□□□ 1.87
TRUB2O95900 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
TRUB2O95900 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
TRUB2O95900 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRUB2O95900 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRUB2O95900 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.71■■□□□ 1.87
TRUB2O95900 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.71■■□□□ 1.87
TRUB2O95900 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TRUB2O95900 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.7■■□□□ 1.86
TRUB2O95900 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRUB2O95900 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRUB2O95900 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.7■■□□□ 1.86
TRUB2O95900 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
TRUB2O95900 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.69■■□□□ 1.86
TRUB2O95900 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L13-201ENST00000554103 1267 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L15-201ENST00000611059 1267 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L23-201ENST00000615195 1269 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L24-201ENST00000617576 1269 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L22-201ENST00000618238 1269 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L20-201ENST00000619712 1269 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L21-201ENST00000622058 1269 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L10-201ENST00000622460 1267 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 DUX4L25-201ENST00000624915 1269 ntBASIC26.69■■□□□ 1.86
TRUB2O95900 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.69■■□□□ 1.86
TRUB2O95900 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRUB2O95900 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
TRUB2O95900 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRUB2O95900 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.67■■□□□ 1.86
TRUB2O95900 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TRUB2O95900 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.66■■□□□ 1.86
TRUB2O95900 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.66■■□□□ 1.86
TRUB2O95900 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.66■■□□□ 1.86
TRUB2O95900 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRUB2O95900 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRUB2O95900 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRUB2O95900 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.65■■□□□ 1.86
TRUB2O95900 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRUB2O95900 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRUB2O95900 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRUB2O95900 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRUB2O95900 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.64■■□□□ 1.86
TRUB2O95900 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TRUB2O95900 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.63■■□□□ 1.85
TRUB2O95900 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.63■■□□□ 1.85
TRUB2O95900 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
TRUB2O95900 CR559946.2-201ENST00000623684 991 ntBASIC26.62■■□□□ 1.85
TRUB2O95900 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.62■■□□□ 1.85
TRUB2O95900 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRUB2O95900 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRUB2O95900 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.61■■□□□ 1.85
TRUB2O95900 MIR3648-2-201ENST00000581792 180 ntBASIC26.61■■□□□ 1.85
TRUB2O95900 MIR3648-1-201ENST00000615959 180 ntBASIC26.61■■□□□ 1.85
TRUB2O95900 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TRUB2O95900 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TRUB2O95900 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
TRUB2O95900 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRUB2O95900 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRUB2O95900 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.6■■□□□ 1.85
TRUB2O95900 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TRUB2O95900 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
TRUB2O95900 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRUB2O95900 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRUB2O95900 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TRUB2O95900 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRUB2O95900 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
TRUB2O95900 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRUB2O95900 AC110285.7-201ENST00000624417 1536 ntBASIC26.57■■□□□ 1.84
TRUB2O95900 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.57■■□□□ 1.84
TRUB2O95900 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRUB2O95900 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
TRUB2O95900 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
TRUB2O95900 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRUB2O95900 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRUB2O95900 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRUB2O95900 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.55■■□□□ 1.84
TRUB2O95900 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.55■■□□□ 1.84
TRUB2O95900 AC016575.1-201ENST00000607026 382 ntBASIC26.55■■□□□ 1.84
TRUB2O95900 AP002414.2-202ENST00000590929 1450 ntBASIC26.55■■□□□ 1.84
TRUB2O95900 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRUB2O95900 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.53■■□□□ 1.84
TRUB2O95900 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRUB2O95900 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRUB2O95900 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRUB2O95900 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRUB2O95900 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRUB2O95900 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TRUB2O95900 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
TRUB2O95900 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRUB2O95900 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.5■■□□□ 1.83
TRUB2O95900 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRUB2O95900 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.49■■□□□ 1.83
TRUB2O95900 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRUB2O95900 BX255925.1-201ENST00000566954 1854 ntBASIC26.49■■□□□ 1.83
TRUB2O95900 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.48■■□□□ 1.83
TRUB2O95900 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms