Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SNCGO76070 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.23■□□□□ 0.35
SNCGO76070 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC17.23■□□□□ 0.35
SNCGO76070 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNCGO76070 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNCGO76070 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.22■□□□□ 0.35
SNCGO76070 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNCGO76070 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNCGO76070 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCGO76070 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SNCGO76070 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCGO76070 AL121749.1-202ENST00000609313 2153 ntBASIC17.21■□□□□ 0.35
SNCGO76070 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCGO76070 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNCGO76070 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SNCGO76070 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNCGO76070 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNCGO76070 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNCGO76070 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SNCGO76070 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNCGO76070 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNCGO76070 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SNCGO76070 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNCGO76070 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SNCGO76070 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNCGO76070 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNCGO76070 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNCGO76070 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNCGO76070 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.17■□□□□ 0.34
SNCGO76070 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNCGO76070 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNCGO76070 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNCGO76070 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SNCGO76070 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNCGO76070 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCGO76070 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCGO76070 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNCGO76070 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCGO76070 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SNCGO76070 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNCGO76070 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.15■□□□□ 0.34
SNCGO76070 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SNCGO76070 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNCGO76070 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SNCGO76070 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SNCGO76070 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SNCGO76070 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCGO76070 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.14■□□□□ 0.33
SNCGO76070 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.13■□□□□ 0.33
SNCGO76070 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SNCGO76070 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.13■□□□□ 0.33
SNCGO76070 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNCGO76070 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SNCGO76070 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNCGO76070 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNCGO76070 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNCGO76070 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SNCGO76070 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNCGO76070 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.11■□□□□ 0.33
SNCGO76070 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SNCGO76070 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.11■□□□□ 0.33
SNCGO76070 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
SNCGO76070 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNCGO76070 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.1■□□□□ 0.33
SNCGO76070 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SNCGO76070 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNCGO76070 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC17.1■□□□□ 0.33
SNCGO76070 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.1■□□□□ 0.33
SNCGO76070 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SNCGO76070 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNCGO76070 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNCGO76070 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNCGO76070 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNCGO76070 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SNCGO76070 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNCGO76070 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNCGO76070 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SNCGO76070 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNCGO76070 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNCGO76070 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNCGO76070 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.07■□□□□ 0.32
SNCGO76070 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNCGO76070 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNCGO76070 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNCGO76070 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNCGO76070 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNCGO76070 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNCGO76070 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNCGO76070 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNCGO76070 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNCGO76070 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms