Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.87■■■□□ 2.69
GRIN3BO60391 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.86■■■□□ 2.69
GRIN3BO60391 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
GRIN3BO60391 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.86■■■□□ 2.69
GRIN3BO60391 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
GRIN3BO60391 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
GRIN3BO60391 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.85■■■□□ 2.69
GRIN3BO60391 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.85■■■□□ 2.69
GRIN3BO60391 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.85■■■□□ 2.69
GRIN3BO60391 AC126177.7-201ENST00000547904 679 ntBASIC31.85■■■□□ 2.69
GRIN3BO60391 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
GRIN3BO60391 AC074183.2-201ENST00000623112 922 ntBASIC31.85■■■□□ 2.69
GRIN3BO60391 MIR219A2-201ENST00000608502 1504 ntBASIC31.85■■■□□ 2.69
GRIN3BO60391 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.84■■■□□ 2.69
GRIN3BO60391 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.84■■■□□ 2.69
GRIN3BO60391 BHLHE23-202ENST00000612929 1109 ntBASIC31.84■■■□□ 2.69
GRIN3BO60391 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
GRIN3BO60391 AC007029.1-201ENST00000604183 313 ntBASIC31.83■■■□□ 2.69
GRIN3BO60391 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
GRIN3BO60391 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.83■■■□□ 2.69
GRIN3BO60391 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
GRIN3BO60391 AC009831.1-201ENST00000580420 1582 ntBASIC31.82■■■□□ 2.68
GRIN3BO60391 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
GRIN3BO60391 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
GRIN3BO60391 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
GRIN3BO60391 KRT8P33-201ENST00000508125 1423 ntBASIC31.82■■■□□ 2.68
GRIN3BO60391 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.8■■■□□ 2.68
GRIN3BO60391 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.79■■■□□ 2.68
GRIN3BO60391 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
GRIN3BO60391 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
GRIN3BO60391 AC010980.1-201ENST00000587192 1142 ntBASIC31.79■■■□□ 2.68
GRIN3BO60391 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.79■■■□□ 2.68
GRIN3BO60391 YBX1P4-201ENST00000392794 808 ntBASIC31.77■■■□□ 2.68
GRIN3BO60391 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.77■■■□□ 2.68
GRIN3BO60391 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
GRIN3BO60391 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.77■■■□□ 2.68
GRIN3BO60391 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.77■■■□□ 2.68
GRIN3BO60391 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
GRIN3BO60391 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.77■■■□□ 2.68
GRIN3BO60391 AC110285.7-201ENST00000624417 1536 ntBASIC31.76■■■□□ 2.68
GRIN3BO60391 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
GRIN3BO60391 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.76■■■□□ 2.67
GRIN3BO60391 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
GRIN3BO60391 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
GRIN3BO60391 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
GRIN3BO60391 AL356441.2-201ENST00000443009 864 ntBASIC31.75■■■□□ 2.67
GRIN3BO60391 AC025884.2-201ENST00000553429 711 ntBASIC31.75■■■□□ 2.67
GRIN3BO60391 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.75■■■□□ 2.67
GRIN3BO60391 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
GRIN3BO60391 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.75■■■□□ 2.67
GRIN3BO60391 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
GRIN3BO60391 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.73■■■□□ 2.67
GRIN3BO60391 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.73■■■□□ 2.67
GRIN3BO60391 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.73■■■□□ 2.67
GRIN3BO60391 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
GRIN3BO60391 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
GRIN3BO60391 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
GRIN3BO60391 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
GRIN3BO60391 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
GRIN3BO60391 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
GRIN3BO60391 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
GRIN3BO60391 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
GRIN3BO60391 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.69■■■□□ 2.66
GRIN3BO60391 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.69■■■□□ 2.66
GRIN3BO60391 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
GRIN3BO60391 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.68■■■□□ 2.66
GRIN3BO60391 AL157400.5-201ENST00000507624 621 ntBASIC31.68■■■□□ 2.66
GRIN3BO60391 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.67■■■□□ 2.66
GRIN3BO60391 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
GRIN3BO60391 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.66■■■□□ 2.66
GRIN3BO60391 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.66■■■□□ 2.66
GRIN3BO60391 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.66■■■□□ 2.66
GRIN3BO60391 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
GRIN3BO60391 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
GRIN3BO60391 WHAMMP2-203ENST00000563942 1603 ntBASIC31.65■■■□□ 2.66
GRIN3BO60391 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
GRIN3BO60391 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
GRIN3BO60391 AC103834.1-201ENST00000520383 144 ntBASIC31.65■■■□□ 2.66
GRIN3BO60391 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
GRIN3BO60391 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
GRIN3BO60391 AC135983.2-203ENST00000454486 1613 ntBASIC31.64■■■□□ 2.66
GRIN3BO60391 DUX4L9-201ENST00000449051 1259 ntBASIC31.64■■■□□ 2.66
GRIN3BO60391 AC008406.3-201ENST00000620001 1374 ntBASIC31.64■■■□□ 2.66
GRIN3BO60391 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.64■■■□□ 2.65
GRIN3BO60391 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
GRIN3BO60391 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
GRIN3BO60391 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.62■■■□□ 2.65
GRIN3BO60391 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.62■■■□□ 2.65
GRIN3BO60391 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.61■■■□□ 2.65
GRIN3BO60391 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.61■■■□□ 2.65
GRIN3BO60391 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
GRIN3BO60391 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
GRIN3BO60391 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.6■■■□□ 2.65
GRIN3BO60391 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.59■■■□□ 2.65
GRIN3BO60391 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms