Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
URB1O60287 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
URB1O60287 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.15■■□□□ 1.46
URB1O60287 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.15■■□□□ 1.46
URB1O60287 ECEL1P2-201ENST00000461596 1295 ntBASIC24.15■■□□□ 1.46
URB1O60287 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
URB1O60287 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
URB1O60287 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
URB1O60287 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
URB1O60287 AC009299.2-201ENST00000482477 511 ntBASIC24.14■■□□□ 1.45
URB1O60287 MIR219A2-201ENST00000608502 1504 ntBASIC24.14■■□□□ 1.45
URB1O60287 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
URB1O60287 DUX4L18-201ENST00000553347 1267 ntBASIC24.13■■□□□ 1.45
URB1O60287 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.13■■□□□ 1.45
URB1O60287 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
URB1O60287 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
URB1O60287 AC135983.2-203ENST00000454486 1613 ntBASIC24.12■■□□□ 1.45
URB1O60287 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
URB1O60287 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
URB1O60287 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
URB1O60287 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
URB1O60287 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
URB1O60287 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.11■■□□□ 1.45
URB1O60287 WHAMMP2-203ENST00000563942 1603 ntBASIC24.11■■□□□ 1.45
URB1O60287 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
URB1O60287 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
URB1O60287 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
URB1O60287 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.1■■□□□ 1.45
URB1O60287 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.1■■□□□ 1.45
URB1O60287 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.1■■□□□ 1.45
URB1O60287 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
URB1O60287 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
URB1O60287 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
URB1O60287 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
URB1O60287 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
URB1O60287 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.09■■□□□ 1.45
URB1O60287 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.09■■□□□ 1.45
URB1O60287 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
URB1O60287 AC133552.2-201ENST00000619106 1032 ntBASIC24.08■■□□□ 1.45
URB1O60287 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.08■■□□□ 1.44
URB1O60287 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.07■■□□□ 1.44
URB1O60287 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.07■■□□□ 1.44
URB1O60287 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.07■■□□□ 1.44
URB1O60287 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
URB1O60287 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
URB1O60287 MIR935-201ENST00000401179 91 ntBASIC24.06■■□□□ 1.44
URB1O60287 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
URB1O60287 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
URB1O60287 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
URB1O60287 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
URB1O60287 AC010864.1-201ENST00000609407 1511 ntBASIC24.05■■□□□ 1.44
URB1O60287 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
URB1O60287 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
URB1O60287 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
URB1O60287 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
URB1O60287 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
URB1O60287 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.04■■□□□ 1.44
URB1O60287 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
URB1O60287 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.03■■□□□ 1.44
URB1O60287 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
URB1O60287 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.03■■□□□ 1.44
URB1O60287 AL592293.1-201ENST00000502889 1188 ntBASIC24.03■■□□□ 1.44
URB1O60287 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
URB1O60287 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
URB1O60287 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
URB1O60287 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
URB1O60287 AC110285.7-201ENST00000624417 1536 ntBASIC24.02■■□□□ 1.44
URB1O60287 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
URB1O60287 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.01■■□□□ 1.43
URB1O60287 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
URB1O60287 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.01■■□□□ 1.43
URB1O60287 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
URB1O60287 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
URB1O60287 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24■■□□□ 1.43
URB1O60287 GUSBP5-201ENST00000418136 578 ntBASIC24■■□□□ 1.43
URB1O60287 THA1P-201ENST00000590384 1145 ntBASIC24■■□□□ 1.43
URB1O60287 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
URB1O60287 AC120057.4-201ENST00000624722 1615 ntBASIC23.99■■□□□ 1.43
URB1O60287 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
URB1O60287 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
URB1O60287 AL161658.1-201ENST00000623641 1967 ntBASIC23.98■■□□□ 1.43
URB1O60287 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
URB1O60287 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.97■■□□□ 1.43
URB1O60287 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.97■■□□□ 1.43
URB1O60287 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.97■■□□□ 1.43
URB1O60287 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
URB1O60287 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.97■■□□□ 1.43
URB1O60287 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.97■■□□□ 1.43
URB1O60287 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
URB1O60287 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
URB1O60287 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
URB1O60287 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
URB1O60287 AC009831.1-201ENST00000580420 1582 ntBASIC23.96■■□□□ 1.43
URB1O60287 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
URB1O60287 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
URB1O60287 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.96■■□□□ 1.43
URB1O60287 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.96■■□□□ 1.43
URB1O60287 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.96■■□□□ 1.43
URB1O60287 RP9P-202ENST00000450133 1212 ntBASIC23.95■■□□□ 1.43
URB1O60287 AL157400.5-201ENST00000507624 621 ntBASIC23.95■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms