Protein–RNA interactions for Protein: O43511

SLC26A4, Pendrin, humanhuman

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC26A4O43511 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.5■■■□□ 2.15
SLC26A4O43511 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.48■■■□□ 2.15
SLC26A4O43511 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
SLC26A4O43511 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
SLC26A4O43511 ZNRF2P2-203ENST00000454624 420 ntBASIC28.46■■■□□ 2.15
SLC26A4O43511 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SLC26A4O43511 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
SLC26A4O43511 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.45■■■□□ 2.14
SLC26A4O43511 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SLC26A4O43511 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SLC26A4O43511 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
SLC26A4O43511 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.43■■■□□ 2.14
SLC26A4O43511 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.43■■■□□ 2.14
SLC26A4O43511 ABHD17AP4-201ENST00000411545 909 ntBASIC28.43■■■□□ 2.14
SLC26A4O43511 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.43■■■□□ 2.14
SLC26A4O43511 AC110285.7-201ENST00000624417 1536 ntBASIC28.43■■■□□ 2.14
SLC26A4O43511 AC018358.1-201ENST00000631079 1402 ntBASIC28.43■■■□□ 2.14
SLC26A4O43511 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.42■■■□□ 2.14
SLC26A4O43511 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
SLC26A4O43511 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.42■■■□□ 2.14
SLC26A4O43511 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.42■■■□□ 2.14
SLC26A4O43511 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SLC26A4O43511 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC26A4O43511 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L13-201ENST00000554103 1267 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L15-201ENST00000611059 1267 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L23-201ENST00000615195 1269 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L24-201ENST00000617576 1269 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L22-201ENST00000618238 1269 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L20-201ENST00000619712 1269 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L21-201ENST00000622058 1269 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L10-201ENST00000622460 1267 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 DUX4L25-201ENST00000624915 1269 ntBASIC28.41■■■□□ 2.14
SLC26A4O43511 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC26A4O43511 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SLC26A4O43511 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SLC26A4O43511 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SLC26A4O43511 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SLC26A4O43511 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SLC26A4O43511 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
SLC26A4O43511 DUX4L11-201ENST00000611504 1267 ntBASIC28.39■■■□□ 2.14
SLC26A4O43511 DUX4L12-201ENST00000614593 1267 ntBASIC28.39■■■□□ 2.14
SLC26A4O43511 DUX4L14-201ENST00000621227 1267 ntBASIC28.39■■■□□ 2.14
SLC26A4O43511 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
SLC26A4O43511 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
SLC26A4O43511 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SLC26A4O43511 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC26A4O43511 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.37■■■□□ 2.13
SLC26A4O43511 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC26A4O43511 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SLC26A4O43511 BX255925.1-201ENST00000566954 1854 ntBASIC28.36■■■□□ 2.13
SLC26A4O43511 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
SLC26A4O43511 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SLC26A4O43511 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SLC26A4O43511 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.36■■■□□ 2.13
SLC26A4O43511 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SLC26A4O43511 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.35■■■□□ 2.13
SLC26A4O43511 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SLC26A4O43511 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
SLC26A4O43511 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.34■■■□□ 2.13
SLC26A4O43511 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
SLC26A4O43511 LINC01003-201ENST00000564834 1764 ntBASIC28.33■■■□□ 2.13
SLC26A4O43511 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.33■■■□□ 2.13
SLC26A4O43511 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SLC26A4O43511 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.32■■■□□ 2.12
SLC26A4O43511 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC26A4O43511 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SLC26A4O43511 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.31■■■□□ 2.12
SLC26A4O43511 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SLC26A4O43511 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SLC26A4O43511 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLC26A4O43511 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC26A4O43511 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.29■■■□□ 2.12
SLC26A4O43511 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC26A4O43511 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC26A4O43511 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC26A4O43511 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SLC26A4O43511 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SLC26A4O43511 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC26A4O43511 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC26A4O43511 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SLC26A4O43511 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SLC26A4O43511 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SLC26A4O43511 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.27■■■□□ 2.12
SLC26A4O43511 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.27■■■□□ 2.12
SLC26A4O43511 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
SLC26A4O43511 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SLC26A4O43511 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.26■■■□□ 2.11
SLC26A4O43511 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.26■■■□□ 2.11
SLC26A4O43511 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SLC26A4O43511 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SLC26A4O43511 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.25■■■□□ 2.11
SLC26A4O43511 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.25■■■□□ 2.11
SLC26A4O43511 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SLC26A4O43511 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SLC26A4O43511 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
SLC26A4O43511 AC008813.1-201ENST00000536597 885 ntBASIC28.23■■■□□ 2.11
SLC26A4O43511 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SLC26A4O43511 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
SLC26A4O43511 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms