Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.92■■■□□ 2.06
SOX1O00570 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
SOX1O00570 AL356441.2-201ENST00000443009 864 ntBASIC27.92■■■□□ 2.06
SOX1O00570 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.92■■■□□ 2.06
SOX1O00570 AC009831.1-201ENST00000580420 1582 ntBASIC27.91■■■□□ 2.06
SOX1O00570 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
SOX1O00570 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
SOX1O00570 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SOX1O00570 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SOX1O00570 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SOX1O00570 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SOX1O00570 AC133552.2-201ENST00000619106 1032 ntBASIC27.88■■■□□ 2.05
SOX1O00570 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
SOX1O00570 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SOX1O00570 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SOX1O00570 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
SOX1O00570 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.87■■■□□ 2.05
SOX1O00570 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.86■■■□□ 2.05
SOX1O00570 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.86■■■□□ 2.05
SOX1O00570 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.86■■■□□ 2.05
SOX1O00570 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SOX1O00570 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SOX1O00570 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.85■■■□□ 2.05
SOX1O00570 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.85■■■□□ 2.05
SOX1O00570 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SOX1O00570 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.83■■■□□ 2.05
SOX1O00570 AC103834.1-201ENST00000520383 144 ntBASIC27.83■■■□□ 2.05
SOX1O00570 BHLHE23-202ENST00000612929 1109 ntBASIC27.83■■■□□ 2.05
SOX1O00570 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SOX1O00570 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SOX1O00570 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.82■■■□□ 2.04
SOX1O00570 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.82■■■□□ 2.04
SOX1O00570 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SOX1O00570 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.82■■■□□ 2.04
SOX1O00570 AC007029.1-201ENST00000604183 313 ntBASIC27.82■■■□□ 2.04
SOX1O00570 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.82■■■□□ 2.04
SOX1O00570 MIR219A2-201ENST00000608502 1504 ntBASIC27.82■■■□□ 2.04
SOX1O00570 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SOX1O00570 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.81■■■□□ 2.04
SOX1O00570 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SOX1O00570 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
SOX1O00570 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SOX1O00570 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.8■■■□□ 2.04
SOX1O00570 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
SOX1O00570 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SOX1O00570 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
SOX1O00570 AL157400.5-201ENST00000507624 621 ntBASIC27.78■■■□□ 2.04
SOX1O00570 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SOX1O00570 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.77■■■□□ 2.04
SOX1O00570 AC008406.3-201ENST00000620001 1374 ntBASIC27.77■■■□□ 2.04
SOX1O00570 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.77■■■□□ 2.04
SOX1O00570 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.77■■■□□ 2.04
SOX1O00570 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SOX1O00570 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SOX1O00570 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.76■■■□□ 2.03
SOX1O00570 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
SOX1O00570 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SOX1O00570 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SOX1O00570 YBX1P4-201ENST00000392794 808 ntBASIC27.75■■■□□ 2.03
SOX1O00570 DUX4L9-201ENST00000449051 1259 ntBASIC27.75■■■□□ 2.03
SOX1O00570 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.74■■■□□ 2.03
SOX1O00570 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.73■■■□□ 2.03
SOX1O00570 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
SOX1O00570 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
SOX1O00570 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.72■■■□□ 2.03
SOX1O00570 MIR638-201ENST00000385237 100 ntBASIC27.71■■■□□ 2.03
SOX1O00570 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
SOX1O00570 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.71■■■□□ 2.03
SOX1O00570 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SOX1O00570 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.71■■■□□ 2.03
SOX1O00570 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.7■■■□□ 2.03
SOX1O00570 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SOX1O00570 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.7■■■□□ 2.02
SOX1O00570 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.7■■■□□ 2.02
SOX1O00570 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SOX1O00570 AC110285.7-201ENST00000624417 1536 ntBASIC27.7■■■□□ 2.02
SOX1O00570 AC074183.2-201ENST00000623112 922 ntBASIC27.69■■■□□ 2.02
SOX1O00570 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SOX1O00570 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SOX1O00570 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SOX1O00570 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.68■■■□□ 2.02
SOX1O00570 PVT1_1.1-201ENST00000615125 194 ntBASIC27.68■■■□□ 2.02
SOX1O00570 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SOX1O00570 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.67■■■□□ 2.02
SOX1O00570 WHAMMP2-203ENST00000563942 1603 ntBASIC27.67■■■□□ 2.02
SOX1O00570 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SOX1O00570 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SOX1O00570 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.66■■■□□ 2.02
SOX1O00570 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
SOX1O00570 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.65■■■□□ 2.02
SOX1O00570 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
SOX1O00570 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SOX1O00570 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.64■■■□□ 2.02
SOX1O00570 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SOX1O00570 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
SOX1O00570 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SOX1O00570 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.63■■■□□ 2.01
SOX1O00570 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SOX1O00570 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.63■■■□□ 2.01
SOX1O00570 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms