Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.27■■□□□ 1
NKX6-3A6NJ46 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.27■■□□□ 1
NKX6-3A6NJ46 MIR7108-201ENST00000614319 87 ntBASIC21.27■■□□□ 1
NKX6-3A6NJ46 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.27■□□□□ 0.99
NKX6-3A6NJ46 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NKX6-3A6NJ46 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NKX6-3A6NJ46 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NKX6-3A6NJ46 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-3A6NJ46 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-3A6NJ46 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-3A6NJ46 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-3A6NJ46 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.26■□□□□ 0.99
NKX6-3A6NJ46 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NKX6-3A6NJ46 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L13-201ENST00000554103 1267 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L15-201ENST00000611059 1267 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L23-201ENST00000615195 1269 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L24-201ENST00000617576 1269 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L22-201ENST00000618238 1269 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L20-201ENST00000619712 1269 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L21-201ENST00000622058 1269 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L10-201ENST00000622460 1267 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 DUX4L25-201ENST00000624915 1269 ntBASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NKX6-3A6NJ46 AC110285.7-201ENST00000624417 1536 ntBASIC21.24■□□□□ 0.99
NKX6-3A6NJ46 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKX6-3A6NJ46 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NKX6-3A6NJ46 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKX6-3A6NJ46 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NKX6-3A6NJ46 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NKX6-3A6NJ46 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NKX6-3A6NJ46 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NKX6-3A6NJ46 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKX6-3A6NJ46 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.2■□□□□ 0.98
NKX6-3A6NJ46 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NKX6-3A6NJ46 DRD5P2-201ENST00000421395 2012 ntBASIC21.2■□□□□ 0.98
NKX6-3A6NJ46 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKX6-3A6NJ46 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NKX6-3A6NJ46 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NKX6-3A6NJ46 AP002414.2-202ENST00000590929 1450 ntBASIC21.2■□□□□ 0.98
NKX6-3A6NJ46 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.19■□□□□ 0.98
NKX6-3A6NJ46 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NKX6-3A6NJ46 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.19■□□□□ 0.98
NKX6-3A6NJ46 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NKX6-3A6NJ46 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.19■□□□□ 0.98
NKX6-3A6NJ46 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.18■□□□□ 0.98
NKX6-3A6NJ46 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NKX6-3A6NJ46 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.18■□□□□ 0.98
NKX6-3A6NJ46 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NKX6-3A6NJ46 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.17■□□□□ 0.98
NKX6-3A6NJ46 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NKX6-3A6NJ46 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NKX6-3A6NJ46 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.17■□□□□ 0.98
NKX6-3A6NJ46 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NKX6-3A6NJ46 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NKX6-3A6NJ46 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NKX6-3A6NJ46 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NKX6-3A6NJ46 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-3A6NJ46 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.15■□□□□ 0.98
NKX6-3A6NJ46 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-3A6NJ46 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-3A6NJ46 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-3A6NJ46 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-3A6NJ46 AC142086.6-201ENST00000621154 1765 ntBASIC21.15■□□□□ 0.98
NKX6-3A6NJ46 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NKX6-3A6NJ46 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
NKX6-3A6NJ46 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NKX6-3A6NJ46 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NKX6-3A6NJ46 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 CR559946.2-201ENST00000623684 991 ntBASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NKX6-3A6NJ46 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKX6-3A6NJ46 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NKX6-3A6NJ46 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKX6-3A6NJ46 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKX6-3A6NJ46 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.13■□□□□ 0.97
NKX6-3A6NJ46 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
NKX6-3A6NJ46 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NKX6-3A6NJ46 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NKX6-3A6NJ46 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NKX6-3A6NJ46 MIR3648-2-201ENST00000581792 180 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms