Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.59■■■□□ 2.49
CLRN2A0PK11 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CLRN2A0PK11 AC018358.1-201ENST00000631079 1402 ntBASIC30.59■■■□□ 2.49
CLRN2A0PK11 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CLRN2A0PK11 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CLRN2A0PK11 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.59■■■□□ 2.49
CLRN2A0PK11 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CLRN2A0PK11 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CLRN2A0PK11 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.58■■■□□ 2.49
CLRN2A0PK11 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CLRN2A0PK11 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
CLRN2A0PK11 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.57■■■□□ 2.48
CLRN2A0PK11 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.56■■■□□ 2.48
CLRN2A0PK11 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CLRN2A0PK11 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CLRN2A0PK11 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CLRN2A0PK11 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CLRN2A0PK11 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.55■■■□□ 2.48
CLRN2A0PK11 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CLRN2A0PK11 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CLRN2A0PK11 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
CLRN2A0PK11 AC092296.2-201ENST00000589470 999 ntBASIC30.53■■■□□ 2.48
CLRN2A0PK11 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLRN2A0PK11 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLRN2A0PK11 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLRN2A0PK11 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.51■■■□□ 2.48
CLRN2A0PK11 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CLRN2A0PK11 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CLRN2A0PK11 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.5■■■□□ 2.47
CLRN2A0PK11 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
CLRN2A0PK11 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.5■■■□□ 2.47
CLRN2A0PK11 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CLRN2A0PK11 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CLRN2A0PK11 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CLRN2A0PK11 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CLRN2A0PK11 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CLRN2A0PK11 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CLRN2A0PK11 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
CLRN2A0PK11 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CLRN2A0PK11 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CLRN2A0PK11 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
CLRN2A0PK11 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CLRN2A0PK11 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CLRN2A0PK11 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CLRN2A0PK11 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CLRN2A0PK11 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.48■■■□□ 2.47
CLRN2A0PK11 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CLRN2A0PK11 KRT18P60-201ENST00000312876 1297 ntBASIC30.47■■■□□ 2.47
CLRN2A0PK11 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CLRN2A0PK11 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.46■■■□□ 2.47
CLRN2A0PK11 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.46■■■□□ 2.47
CLRN2A0PK11 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CLRN2A0PK11 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.46■■■□□ 2.47
CLRN2A0PK11 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
CLRN2A0PK11 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CLRN2A0PK11 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CLRN2A0PK11 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CLRN2A0PK11 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CLRN2A0PK11 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.44■■■□□ 2.46
CLRN2A0PK11 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CLRN2A0PK11 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CLRN2A0PK11 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CLRN2A0PK11 AC004987.1-201ENST00000428627 508 ntBASIC30.42■■■□□ 2.46
CLRN2A0PK11 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.42■■■□□ 2.46
CLRN2A0PK11 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.42■■■□□ 2.46
CLRN2A0PK11 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.41■■■□□ 2.46
CLRN2A0PK11 ECEL1P2-201ENST00000461596 1295 ntBASIC30.41■■■□□ 2.46
CLRN2A0PK11 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.4■■■□□ 2.46
CLRN2A0PK11 TSPY13P-201ENST00000338964 914 ntBASIC30.4■■■□□ 2.46
CLRN2A0PK11 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
CLRN2A0PK11 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.4■■■□□ 2.46
CLRN2A0PK11 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CLRN2A0PK11 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC30.39■■■□□ 2.46
CLRN2A0PK11 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CLRN2A0PK11 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.39■■■□□ 2.46
CLRN2A0PK11 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.39■■■□□ 2.46
CLRN2A0PK11 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
CLRN2A0PK11 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CLRN2A0PK11 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.39■■■□□ 2.45
CLRN2A0PK11 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.38■■■□□ 2.45
CLRN2A0PK11 ATP5G2P3-201ENST00000429083 425 ntBASIC30.38■■■□□ 2.45
CLRN2A0PK11 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
CLRN2A0PK11 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
CLRN2A0PK11 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.37■■■□□ 2.45
CLRN2A0PK11 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CLRN2A0PK11 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CLRN2A0PK11 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CLRN2A0PK11 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
CLRN2A0PK11 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CLRN2A0PK11 AL157400.5-201ENST00000507624 621 ntBASIC30.35■■■□□ 2.45
CLRN2A0PK11 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CLRN2A0PK11 AC126177.7-201ENST00000547904 679 ntBASIC30.34■■■□□ 2.45
CLRN2A0PK11 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.33■■■□□ 2.45
CLRN2A0PK11 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.33■■■□□ 2.45
CLRN2A0PK11 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.33■■■□□ 2.45
CLRN2A0PK11 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CLRN2A0PK11 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CLRN2A0PK11 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CLRN2A0PK11 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CLRN2A0PK11 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms