Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.26■■□□□ 1.63
TRBV5-4A0A0C4DH59 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRBV5-4A0A0C4DH59 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRBV5-4A0A0C4DH59 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRBV5-4A0A0C4DH59 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.25■■□□□ 1.63
TRBV5-4A0A0C4DH59 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.25■■□□□ 1.63
TRBV5-4A0A0C4DH59 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRBV5-4A0A0C4DH59 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
TRBV5-4A0A0C4DH59 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRBV5-4A0A0C4DH59 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.24■■□□□ 1.63
TRBV5-4A0A0C4DH59 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L11-201ENST00000611504 1267 ntBASIC25.23■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L12-201ENST00000614593 1267 ntBASIC25.23■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L14-201ENST00000621227 1267 ntBASIC25.23■■□□□ 1.63
TRBV5-4A0A0C4DH59 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRBV5-4A0A0C4DH59 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.22■■□□□ 1.63
TRBV5-4A0A0C4DH59 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.22■■□□□ 1.63
TRBV5-4A0A0C4DH59 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L13-201ENST00000554103 1267 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L15-201ENST00000611059 1267 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L23-201ENST00000615195 1269 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L24-201ENST00000617576 1269 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L22-201ENST00000618238 1269 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L20-201ENST00000619712 1269 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L21-201ENST00000622058 1269 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L10-201ENST00000622460 1267 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 DUX4L25-201ENST00000624915 1269 ntBASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRBV5-4A0A0C4DH59 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.2■■□□□ 1.62
TRBV5-4A0A0C4DH59 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.2■■□□□ 1.62
TRBV5-4A0A0C4DH59 AC110285.7-201ENST00000624417 1536 ntBASIC25.2■■□□□ 1.62
TRBV5-4A0A0C4DH59 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.19■■□□□ 1.62
TRBV5-4A0A0C4DH59 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRBV5-4A0A0C4DH59 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRBV5-4A0A0C4DH59 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRBV5-4A0A0C4DH59 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.18■■□□□ 1.62
TRBV5-4A0A0C4DH59 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRBV5-4A0A0C4DH59 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.17■■□□□ 1.62
TRBV5-4A0A0C4DH59 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.16■■□□□ 1.62
TRBV5-4A0A0C4DH59 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
TRBV5-4A0A0C4DH59 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRBV5-4A0A0C4DH59 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TRBV5-4A0A0C4DH59 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRBV5-4A0A0C4DH59 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
TRBV5-4A0A0C4DH59 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.13■■□□□ 1.61
TRBV5-4A0A0C4DH59 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRBV5-4A0A0C4DH59 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRBV5-4A0A0C4DH59 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.12■■□□□ 1.61
TRBV5-4A0A0C4DH59 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.12■■□□□ 1.61
TRBV5-4A0A0C4DH59 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRBV5-4A0A0C4DH59 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRBV5-4A0A0C4DH59 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TRBV5-4A0A0C4DH59 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRBV5-4A0A0C4DH59 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.11■■□□□ 1.61
TRBV5-4A0A0C4DH59 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRBV5-4A0A0C4DH59 AC018358.1-201ENST00000631079 1402 ntBASIC25.11■■□□□ 1.61
TRBV5-4A0A0C4DH59 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRBV5-4A0A0C4DH59 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRBV5-4A0A0C4DH59 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.1■■□□□ 1.61
TRBV5-4A0A0C4DH59 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRBV5-4A0A0C4DH59 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRBV5-4A0A0C4DH59 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRBV5-4A0A0C4DH59 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRBV5-4A0A0C4DH59 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRBV5-4A0A0C4DH59 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.09■■□□□ 1.61
TRBV5-4A0A0C4DH59 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TRBV5-4A0A0C4DH59 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
TRBV5-4A0A0C4DH59 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRBV5-4A0A0C4DH59 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
TRBV5-4A0A0C4DH59 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TRBV5-4A0A0C4DH59 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRBV5-4A0A0C4DH59 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TRBV5-4A0A0C4DH59 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
TRBV5-4A0A0C4DH59 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TRBV5-4A0A0C4DH59 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRBV5-4A0A0C4DH59 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.07■■□□□ 1.6
TRBV5-4A0A0C4DH59 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.07■■□□□ 1.6
TRBV5-4A0A0C4DH59 MIR7108-201ENST00000614319 87 ntBASIC25.07■■□□□ 1.6
TRBV5-4A0A0C4DH59 CR559946.2-201ENST00000623684 991 ntBASIC25.07■■□□□ 1.6
TRBV5-4A0A0C4DH59 LINC01003-201ENST00000564834 1764 ntBASIC25.07■■□□□ 1.6
TRBV5-4A0A0C4DH59 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRBV5-4A0A0C4DH59 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.06■■□□□ 1.6
TRBV5-4A0A0C4DH59 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRBV5-4A0A0C4DH59 BX255925.1-201ENST00000566954 1854 ntBASIC25.06■■□□□ 1.6
TRBV5-4A0A0C4DH59 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRBV5-4A0A0C4DH59 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRBV5-4A0A0C4DH59 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRBV5-4A0A0C4DH59 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.04■■□□□ 1.6
TRBV5-4A0A0C4DH59 MIR3648-2-201ENST00000581792 180 ntBASIC25.04■■□□□ 1.6
TRBV5-4A0A0C4DH59 MIR3648-1-201ENST00000615959 180 ntBASIC25.04■■□□□ 1.6
TRBV5-4A0A0C4DH59 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms