Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TRAV6A0A075B6T7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV6A0A075B6T7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV6A0A075B6T7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV6A0A075B6T7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TRAV6A0A075B6T7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV6A0A075B6T7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV6A0A075B6T7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.7■■□□□ 1.06
TRAV6A0A075B6T7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV6A0A075B6T7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAV6A0A075B6T7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV6A0A075B6T7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV6A0A075B6T7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV6A0A075B6T7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRAV6A0A075B6T7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV6A0A075B6T7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV6A0A075B6T7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.67■■□□□ 1.06
TRAV6A0A075B6T7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV6A0A075B6T7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV6A0A075B6T7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV6A0A075B6T7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRAV6A0A075B6T7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV6A0A075B6T7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV6A0A075B6T7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRAV6A0A075B6T7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRAV6A0A075B6T7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRAV6A0A075B6T7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV6A0A075B6T7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.64■■□□□ 1.05
TRAV6A0A075B6T7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
TRAV6A0A075B6T7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV6A0A075B6T7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
TRAV6A0A075B6T7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV6A0A075B6T7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV6A0A075B6T7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV6A0A075B6T7 AC145676.1-201ENST00000514988 2004 ntBASIC21.63■■□□□ 1.05
TRAV6A0A075B6T7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV6A0A075B6T7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV6A0A075B6T7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TRAV6A0A075B6T7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV6A0A075B6T7 AC010864.1-201ENST00000609407 1511 ntBASIC21.61■■□□□ 1.05
TRAV6A0A075B6T7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV6A0A075B6T7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV6A0A075B6T7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.6■■□□□ 1.05
TRAV6A0A075B6T7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV6A0A075B6T7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.6■■□□□ 1.05
TRAV6A0A075B6T7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV6A0A075B6T7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV6A0A075B6T7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV6A0A075B6T7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV6A0A075B6T7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV6A0A075B6T7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRAV6A0A075B6T7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRAV6A0A075B6T7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.57■■□□□ 1.04
TRAV6A0A075B6T7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV6A0A075B6T7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV6A0A075B6T7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.57■■□□□ 1.04
TRAV6A0A075B6T7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.57■■□□□ 1.04
TRAV6A0A075B6T7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV6A0A075B6T7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.56■■□□□ 1.04
TRAV6A0A075B6T7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV6A0A075B6T7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV6A0A075B6T7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV6A0A075B6T7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRAV6A0A075B6T7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV6A0A075B6T7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TRAV6A0A075B6T7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV6A0A075B6T7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV6A0A075B6T7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV6A0A075B6T7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV6A0A075B6T7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAV6A0A075B6T7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV6A0A075B6T7 AP004833.2-201ENST00000532228 1454 ntBASIC21.52■■□□□ 1.04
TRAV6A0A075B6T7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV6A0A075B6T7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV6A0A075B6T7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.52■■□□□ 1.04
TRAV6A0A075B6T7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRAV6A0A075B6T7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV6A0A075B6T7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.51■■□□□ 1.03
TRAV6A0A075B6T7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV6A0A075B6T7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRAV6A0A075B6T7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV6A0A075B6T7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV6A0A075B6T7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAV6A0A075B6T7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV6A0A075B6T7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAV6A0A075B6T7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV6A0A075B6T7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV6A0A075B6T7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRAV6A0A075B6T7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV6A0A075B6T7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV6A0A075B6T7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRAV6A0A075B6T7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms