Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IGKV2-28A0A075B6P5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.68■□□□□ 0.26
IGKV2-28A0A075B6P5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IGKV2-28A0A075B6P5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
IGKV2-28A0A075B6P5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.68■□□□□ 0.26
IGKV2-28A0A075B6P5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.68■□□□□ 0.26
IGKV2-28A0A075B6P5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV2-28A0A075B6P5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV2-28A0A075B6P5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV2-28A0A075B6P5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV2-28A0A075B6P5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.67■□□□□ 0.26
IGKV2-28A0A075B6P5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IGKV2-28A0A075B6P5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
IGKV2-28A0A075B6P5 AP004833.2-201ENST00000532228 1454 ntBASIC16.67■□□□□ 0.26
IGKV2-28A0A075B6P5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV2-28A0A075B6P5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV2-28A0A075B6P5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
IGKV2-28A0A075B6P5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IGKV2-28A0A075B6P5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC16.66■□□□□ 0.26
IGKV2-28A0A075B6P5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV2-28A0A075B6P5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IGKV2-28A0A075B6P5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.65■□□□□ 0.26
IGKV2-28A0A075B6P5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IGKV2-28A0A075B6P5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
IGKV2-28A0A075B6P5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
IGKV2-28A0A075B6P5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IGKV2-28A0A075B6P5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
IGKV2-28A0A075B6P5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IGKV2-28A0A075B6P5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.64■□□□□ 0.25
IGKV2-28A0A075B6P5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.64■□□□□ 0.25
IGKV2-28A0A075B6P5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV2-28A0A075B6P5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
IGKV2-28A0A075B6P5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV2-28A0A075B6P5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV2-28A0A075B6P5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IGKV2-28A0A075B6P5 AC020928.2-201ENST00000588717 2197 ntBASIC16.63■□□□□ 0.25
IGKV2-28A0A075B6P5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.63■□□□□ 0.25
IGKV2-28A0A075B6P5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV2-28A0A075B6P5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
IGKV2-28A0A075B6P5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV2-28A0A075B6P5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV2-28A0A075B6P5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.62■□□□□ 0.25
IGKV2-28A0A075B6P5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IGKV2-28A0A075B6P5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV2-28A0A075B6P5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.61■□□□□ 0.25
IGKV2-28A0A075B6P5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV2-28A0A075B6P5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV2-28A0A075B6P5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
IGKV2-28A0A075B6P5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.61■□□□□ 0.25
IGKV2-28A0A075B6P5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV2-28A0A075B6P5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IGKV2-28A0A075B6P5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV2-28A0A075B6P5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV2-28A0A075B6P5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IGKV2-28A0A075B6P5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
IGKV2-28A0A075B6P5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
IGKV2-28A0A075B6P5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV2-28A0A075B6P5 RARRES2P7-201ENST00000567349 469 ntBASIC16.59■□□□□ 0.25
IGKV2-28A0A075B6P5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.59■□□□□ 0.25
IGKV2-28A0A075B6P5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IGKV2-28A0A075B6P5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IGKV2-28A0A075B6P5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IGKV2-28A0A075B6P5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.58■□□□□ 0.24
IGKV2-28A0A075B6P5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
IGKV2-28A0A075B6P5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC16.58■□□□□ 0.24
IGKV2-28A0A075B6P5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
IGKV2-28A0A075B6P5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.58■□□□□ 0.24
IGKV2-28A0A075B6P5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.58■□□□□ 0.24
IGKV2-28A0A075B6P5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IGKV2-28A0A075B6P5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV2-28A0A075B6P5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
IGKV2-28A0A075B6P5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
IGKV2-28A0A075B6P5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IGKV2-28A0A075B6P5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.57■□□□□ 0.24
IGKV2-28A0A075B6P5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.56■□□□□ 0.24
IGKV2-28A0A075B6P5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.56■□□□□ 0.24
IGKV2-28A0A075B6P5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 AC145676.1-201ENST00000514988 2004 ntBASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
IGKV2-28A0A075B6P5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IGKV2-28A0A075B6P5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IGKV2-28A0A075B6P5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IGKV2-28A0A075B6P5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms