Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MTND1P16-201ENST00000465177 898 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AC010285.1-201ENST00000470580 392 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 HSPE1P6-201ENST00000479457 291 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS2P54868 RNA5SP468-201ENST00000516782 93 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AC105185.1-201ENST00000518705 535 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AP001646.1-201ENST00000527936 915 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS2P54868 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AC009220.3-201ENST00000604318 586 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AL592221.1-201ENST00000605266 382 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS2P54868 AC087241.4-201ENST00000612441 480 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AL590808.1-201ENST00000618696 141 ntBASIC3.13□□□□□ -1.91
HMGCS2P54868 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS2P54868 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS2P54868 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS2P54868 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS2P54868 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS2P54868 AP000526.1-201ENST00000603308 1388 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS2P54868 TAB3P1-202ENST00000452645 1634 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCS2P54868 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS2P54868 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS2P54868 DEFB109C-201ENST00000382575 264 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 DEFB109B-201ENST00000382656 264 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 RNU6-629P-201ENST00000384061 103 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 RNU6-339P-201ENST00000384310 107 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 RPL23AP29-201ENST00000397284 453 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 SNRPEP2-201ENST00000397592 279 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 AF228730.1-201ENST00000397972 663 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 RNU4-78P-201ENST00000410940 126 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 AC107081.1-201ENST00000414975 361 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 TIMM9P2-201ENST00000419324 266 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS2P54868 RPL31P12-201ENST00000422587 358 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 AL008629.1-201ENST00000438615 184 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS2P54868 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS2P54868 RPL39P6-201ENST00000448289 150 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 ANKRD26P4-201ENST00000455755 950 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGCS2P54868 MTCO3P44-201ENST00000510977 541 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGCS2P54868 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGCS2P54868 RNU6-583P-201ENST00000516012 92 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 AC104986.1-201ENST00000517978 436 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGCS2P54868 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS2P54868 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS2P54868 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS2P54868 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS2P54868 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGCS2P54868 MIR3186-201ENST00000577404 85 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCS2P54868 AC090115.4-201ENST00000609970 188 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 AL136164.4-201ENST00000625013 2135 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCS2P54868 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HMGCS2P54868 ELF2P3-201ENST00000445099 1506 ntBASIC3.12□□□□□ -1.91
HMGCS2P54868 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS2P54868 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGCS2P54868 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS2P54868 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS2P54868 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCS2P54868 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS2P54868 AC104454.1-201ENST00000421341 1401 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS2P54868 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS2P54868 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS2P54868 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS2P54868 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS2P54868 MIR26A1-201ENST00000362205 77 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 MIR181A2-201ENST00000384863 110 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 BMS1P22-201ENST00000414726 313 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 HMGB3P23-201ENST00000414981 585 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC009963.1-201ENST00000417265 157 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AL049610.1-201ENST00000423374 372 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 FTH1P1-201ENST00000437933 532 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC092427.1-201ENST00000439177 601 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCS2P54868 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AL606662.1-201ENST00000445763 553 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 HMGB1P15-201ENST00000453854 435 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCS2P54868 RN7SL330P-201ENST00000469709 307 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC093278.1-201ENST00000494700 600 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 HMGB1P22-201ENST00000505315 124 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms