RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
CUBN-201ENST00000377823 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
CUBN-201ENST00000377823 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
CUBN-201ENST00000377823 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
CUBN-201ENST00000377823 POTEDQ86YR6 584 aa15.07■□□□□ 0
CUBN-201ENST00000377823 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
CUBN-201ENST00000377823 FOXD1Q16676 465 aa14.66□□□□□ -0.06
CUBN-201ENST00000377823 MSH5O43196 834 aa14.15□□□□□ -0.14
CUBN-201ENST00000377823 ADRA2BP18089 450 aa14.12□□□□□ -0.15
CUBN-201ENST00000377823 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
CUBN-201ENST00000377823 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
CUBN-201ENST00000377823 KCNA4P22459 653 aa13.28□□□□□ -0.28
CUBN-201ENST00000377823 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
CUBN-201ENST00000377823 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
CUBN-201ENST00000377823 SCAF1Q9H7N4 1312 aaKnown RBP12.92□□□□□ -0.34
CUBN-201ENST00000377823 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
CUBN-201ENST00000377823 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
CUBN-201ENST00000377823 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
CUBN-201ENST00000377823 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
CUBN-201ENST00000377823 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
CUBN-201ENST00000377823 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
CUBN-201ENST00000377823 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
CUBN-201ENST00000377823 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
CUBN-201ENST00000377823 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
CUBN-201ENST00000377823 DNAJC5BQ9UF47 199 aa12.34□□□□□ -0.43
CUBN-201ENST00000377823 HOXD11P31277 338 aaPredicted RBP12.33□□□□□ -0.44
CUBN-201ENST00000377823 ZBTB22O15209 634 aa12.22□□□□□ -0.45
CUBN-201ENST00000377823 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
CUBN-201ENST00000377823 SLC4A2P04920 1241 aa12□□□□□ -0.49
CUBN-201ENST00000377823 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
CUBN-201ENST00000377823 RNF39Q9H2S5 420 aa11.94□□□□□ -0.5
CUBN-201ENST00000377823 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
CUBN-201ENST00000377823 C1QBPQ07021 282 aaKnown RBP11.78□□□□□ -0.52
CUBN-201ENST00000377823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.52
CUBN-201ENST00000377823 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
CUBN-201ENST00000377823 POTEHQ6S545 545 aa11.67□□□□□ -0.54
CUBN-201ENST00000377823 U3KPZ7 1027 aaPredicted RBP11.6□□□□□ -0.55
CUBN-201ENST00000377823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
CUBN-201ENST00000377823 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
CUBN-201ENST00000377823 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
CUBN-201ENST00000377823 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
CUBN-201ENST00000377823 APLP2Q06481 763 aa11.37□□□□□ -0.59
CUBN-201ENST00000377823 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
CUBN-201ENST00000377823 FKBP8Q14318 412 aa11.2□□□□□ -0.62
CUBN-201ENST00000377823 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
CUBN-201ENST00000377823 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
CUBN-201ENST00000377823 CAPN15O75808 1086 aa11.14□□□□□ -0.63
CUBN-201ENST00000377823 POLA2Q14181 598 aa11.05□□□□□ -0.64
CUBN-201ENST00000377823 MKRN4PQ13434 485 aaPredicted RBP10.98□□□□□ -0.65
CUBN-201ENST00000377823 FBLN2P98095 1184 aa10.97□□□□□ -0.65
CUBN-201ENST00000377823 ABCB7O75027 752 aa10.96□□□□□ -0.65
CUBN-201ENST00000377823 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
CUBN-201ENST00000377823 DSG3P32926 999 aa10.89□□□□□ -0.67
CUBN-201ENST00000377823 ZBTB12Q9Y330 459 aaPredicted RBP10.88□□□□□ -0.67
CUBN-201ENST00000377823 PROM2Q8N271 834 aa10.73□□□□□ -0.69
CUBN-201ENST00000377823 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
CUBN-201ENST00000377823 AMER1Q5JTC6 1135 aaPredicted RBP10.72□□□□□ -0.69
CUBN-201ENST00000377823 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
CUBN-201ENST00000377823 OSCARQ8IYS5 282 aa10.66□□□□□ -0.7
CUBN-201ENST00000377823 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
CUBN-201ENST00000377823 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
CUBN-201ENST00000377823 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
CUBN-201ENST00000377823 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
CUBN-201ENST00000377823 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
CUBN-201ENST00000377823 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
CUBN-201ENST00000377823 SSUH2Q9Y2M2 353 aa10.56□□□□□ -0.72
CUBN-201ENST00000377823 CHRDL2Q6WN34 429 aa10.51□□□□□ -0.73
CUBN-201ENST00000377823 RBM42Q9BTD8 480 aaKnown RBP10.51□□□□□ -0.73
CUBN-201ENST00000377823 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
CUBN-201ENST00000377823 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
CUBN-201ENST00000377823 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
CUBN-201ENST00000377823 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
CUBN-201ENST00000377823 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
CUBN-201ENST00000377823 MIER1Q8N108 512 aa10.31□□□□□ -0.76
CUBN-201ENST00000377823 AKT1S1Q96B36 256 aa10.29□□□□□ -0.76
CUBN-201ENST00000377823 SPOCK2Q92563 424 aa10.27□□□□□ -0.77
CUBN-201ENST00000377823 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
CUBN-201ENST00000377823 SPDYE1Q8NFV5 336 aaPredicted RBP10.23□□□□□ -0.77
CUBN-201ENST00000377823 PKD2Q13563 968 aa10.21□□□□□ -0.77
CUBN-201ENST00000377823 REM2Q8IYK8 340 aaPredicted RBP10.2□□□□□ -0.78
CUBN-201ENST00000377823 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
CUBN-201ENST00000377823 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
CUBN-201ENST00000377823 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
CUBN-201ENST00000377823 DCAF8L2P0C7V8 631 aa10.13□□□□□ -0.79
CUBN-201ENST00000377823 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
CUBN-201ENST00000377823 HAX1O00165 279 aa10.1□□□□□ -0.79
CUBN-201ENST00000377823 ECM2O94769 699 aaPredicted RBP10.09□□□□□ -0.79
CUBN-201ENST00000377823 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
CUBN-201ENST00000377823 CIZ1Q9ULV3 898 aaPredicted RBP10.07□□□□□ -0.8
CUBN-201ENST00000377823 PIP4P2Q8N4L2 257 aa10.06□□□□□ -0.8
CUBN-201ENST00000377823 CREBZFQ9NS37 354 aa10.06□□□□□ -0.8
CUBN-201ENST00000377823 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
CUBN-201ENST00000377823 NUBP1P53384 320 aa9.99□□□□□ -0.81
CUBN-201ENST00000377823 RGL2O15211 777 aa9.98□□□□□ -0.81
CUBN-201ENST00000377823 GSE1Q14687 1217 aa9.98□□□□□ -0.81
CUBN-201ENST00000377823 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
CUBN-201ENST00000377823 DCAF8Q5TAQ9 597 aa9.95□□□□□ -0.82
CUBN-201ENST00000377823 PLCB2Q00722 1185 aa9.93□□□□□ -0.82
CUBN-201ENST00000377823 FXR2P51116 673 aaKnown RBP eCLIP9.92□□□□□ -0.82
CUBN-201ENST00000377823 FAM212AQ96EL1 285 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms