Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC005183.1-201ENST00000603687 1979 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFAP04085 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFAP04085 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFAP04085 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PDGFAP04085 ZNF285B-201ENST00000561698 1767 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PDGFAP04085 SAMMSON-213ENST00000641336 1521 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFAP04085 RN7SKP115-201ENST00000363177 317 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 Y_RNA.380-201ENST00000365663 111 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 MT-TR-201ENST00000387439 65 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 MIR765-201ENST00000390226 114 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 MIR550A3-201ENST00000390735 95 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 SNORA68.2-201ENST00000391263 128 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 RN7SKP213-201ENST00000410746 298 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 RN7SKP126-201ENST00000411143 300 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFAP04085 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFAP04085 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.2□□□□□ -1.58
PDGFAP04085 SYF2P2-201ENST00000417620 583 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 RPS15AP6-201ENST00000420703 385 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 EIF4EP1-201ENST00000422311 642 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFAP04085 Z98949.2-201ENST00000440996 144 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.2□□□□□ -1.58
PDGFAP04085 AL162739.1-201ENST00000450606 307 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 AC004129.2-201ENST00000457229 287 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 RPL9P32-201ENST00000464118 620 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 RN7SL197P-201ENST00000466981 299 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 AC008571.1-201ENST00000467232 300 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFAP04085 RN7SKP288-201ENST00000516227 268 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 RNU4-77P-201ENST00000516692 156 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.2□□□□□ -1.58
PDGFAP04085 AC022616.4-201ENST00000522985 181 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 AC104576.1-201ENST00000524225 88 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 HSBP1P1-201ENST00000555205 166 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFAP04085 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.2□□□□□ -1.58
PDGFAP04085 AC005951.2-201ENST00000576282 495 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFAP04085 AC060780.2-201ENST00000589047 198 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 AL355297.3-201ENST00000604082 446 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFAP04085 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.2□□□□□ -1.58
PDGFAP04085 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFAP04085 ASNSP1-201ENST00000518311 1939 ntBASIC5.2□□□□□ -1.58
PDGFAP04085 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFAP04085 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PDGFAP04085 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDGFAP04085 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFAP04085 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFAP04085 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFAP04085 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDGFAP04085 PCAT14-202ENST00000627127 3935 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFAP04085 AC023421.1-201ENST00000590535 1785 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFAP04085 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
PDGFAP04085 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFAP04085 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFAP04085 AP004607.3-201ENST00000530354 3915 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFAP04085 U3.2-201ENST00000362981 210 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 RNU6-450P-201ENST00000364654 107 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 SNORA63.7-201ENST00000365579 123 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 RNU6-26P-201ENST00000383985 107 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 RNU6-823P-201ENST00000391042 103 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 RNU6-1109P-201ENST00000391187 107 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AC097374.1-203ENST00000400783 485 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AL133270.1-201ENST00000402635 279 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFAP04085 MTATP6P4-201ENST00000427725 675 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 FTH1P25-201ENST00000447665 469 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AL360271.2-201ENST00000447710 161 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AC083899.1-201ENST00000454465 3819 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AC112492.4-201ENST00000456549 352 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 MTND3P25-201ENST00000509243 135 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDGFAP04085 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFAP04085 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.19□□□□□ -1.58
PDGFAP04085 AC084783.1-201ENST00000565846 910 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 LRRC37A5P-203ENST00000580181 585 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 OR1M4P-201ENST00000589199 287 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AC000068.2-201ENST00000608816 460 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AC034102.8-201ENST00000615146 484 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AL138825.1-201ENST00000618587 192 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AL353748.2-201ENST00000622148 471 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 AC073869.8-201ENST00000641806 335 ntBASIC5.19□□□□□ -1.58
PDGFAP04085 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PDGFAP04085 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFAP04085 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PDGFAP04085 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.19□□□□□ -1.58
PDGFAP04085 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFAP04085 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PDGFAP04085 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDGFAP04085 AL139811.1-201ENST00000424779 2299 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms