RNA–Protein interactions for RNA: ENST00000604082.1

AL355297.3-201, humanhuman

BASIC

Gene AL355297.3, Length 446 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355297.3-201ENST00000604082 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
AL355297.3-201ENST00000604082 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
AL355297.3-201ENST00000604082 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
AL355297.3-201ENST00000604082 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
AL355297.3-201ENST00000604082 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
AL355297.3-201ENST00000604082 FOXD1Q16676 465 aa15.81■□□□□ 0.12
AL355297.3-201ENST00000604082 MSH5O43196 834 aa15.25■□□□□ 0.03
AL355297.3-201ENST00000604082 PIAS4Q8N2W9 510 aaPredicted RBP14.49□□□□□ -0.09
AL355297.3-201ENST00000604082 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
AL355297.3-201ENST00000604082 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
AL355297.3-201ENST00000604082 ADRA2BP18089 450 aa14.17□□□□□ -0.14
AL355297.3-201ENST00000604082 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
AL355297.3-201ENST00000604082 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
AL355297.3-201ENST00000604082 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
AL355297.3-201ENST00000604082 POTEHQ6S545 545 aa12.94□□□□□ -0.34
AL355297.3-201ENST00000604082 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
AL355297.3-201ENST00000604082 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
AL355297.3-201ENST00000604082 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
AL355297.3-201ENST00000604082 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
AL355297.3-201ENST00000604082 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
AL355297.3-201ENST00000604082 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.42
AL355297.3-201ENST00000604082 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
AL355297.3-201ENST00000604082 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
AL355297.3-201ENST00000604082 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
AL355297.3-201ENST00000604082 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
AL355297.3-201ENST00000604082 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
AL355297.3-201ENST00000604082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
AL355297.3-201ENST00000604082 KCNA4P22459 653 aa11.75□□□□□ -0.53
AL355297.3-201ENST00000604082 DSG3P32926 999 aa11.69□□□□□ -0.54
AL355297.3-201ENST00000604082 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
AL355297.3-201ENST00000604082 SP7Q8TDD2 431 aaPredicted RBP11.6□□□□□ -0.55
AL355297.3-201ENST00000604082 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
AL355297.3-201ENST00000604082 CAPN15O75808 1086 aa11.47□□□□□ -0.57
AL355297.3-201ENST00000604082 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
AL355297.3-201ENST00000604082 CHRDL2Q6WN34 429 aa11.4□□□□□ -0.58
AL355297.3-201ENST00000604082 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
AL355297.3-201ENST00000604082 RBM42Q9BTD8 480 aaKnown RBP11.19□□□□□ -0.62
AL355297.3-201ENST00000604082 ABCB7O75027 752 aa11.18□□□□□ -0.62
AL355297.3-201ENST00000604082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
AL355297.3-201ENST00000604082 APLP2Q06481 763 aa11.13□□□□□ -0.63
AL355297.3-201ENST00000604082 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
AL355297.3-201ENST00000604082 ZNF219Q9P2Y4 722 aaPredicted RBP11.13□□□□□ -0.63
AL355297.3-201ENST00000604082 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
AL355297.3-201ENST00000604082 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
AL355297.3-201ENST00000604082 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
AL355297.3-201ENST00000604082 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
AL355297.3-201ENST00000604082 HAX1O00165 279 aa10.96□□□□□ -0.65
AL355297.3-201ENST00000604082 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
AL355297.3-201ENST00000604082 POLA2Q14181 598 aa10.9□□□□□ -0.66
AL355297.3-201ENST00000604082 ATF5Q9Y2D1 282 aaPredicted RBP10.89□□□□□ -0.67
AL355297.3-201ENST00000604082 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
AL355297.3-201ENST00000604082 LHX8Q68G74 356 aa10.86□□□□□ -0.67
AL355297.3-201ENST00000604082 ZBTB22O15209 634 aa10.84□□□□□ -0.67
AL355297.3-201ENST00000604082 EVX2Q03828 476 aa10.76□□□□□ -0.69
AL355297.3-201ENST00000604082 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
AL355297.3-201ENST00000604082 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
AL355297.3-201ENST00000604082 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
AL355297.3-201ENST00000604082 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
AL355297.3-201ENST00000604082 OSCARQ8IYS5 282 aa10.59□□□□□ -0.71
AL355297.3-201ENST00000604082 ATXN8OSP0DMR3 200 aa10.54□□□□□ -0.72
AL355297.3-201ENST00000604082 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
AL355297.3-201ENST00000604082 GABBR2O75899 941 aa10.45□□□□□ -0.74
AL355297.3-201ENST00000604082 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
AL355297.3-201ENST00000604082 C19orf67A6NJJ6 358 aa10.34□□□□□ -0.75
AL355297.3-201ENST00000604082 FBLN2P98095 1184 aa10.34□□□□□ -0.75
AL355297.3-201ENST00000604082 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
AL355297.3-201ENST00000604082 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
AL355297.3-201ENST00000604082 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
AL355297.3-201ENST00000604082 POTEMA6NI47 508 aa10.29□□□□□ -0.76
AL355297.3-201ENST00000604082 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
AL355297.3-201ENST00000604082 POTEIP0CG38 1075 aa10.24□□□□□ -0.77
AL355297.3-201ENST00000604082 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
AL355297.3-201ENST00000604082 SSUH2Q9Y2M2 353 aa10.2□□□□□ -0.78
AL355297.3-201ENST00000604082 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
AL355297.3-201ENST00000604082 ZNF692Q9BU19 519 aaPredicted RBP10.19□□□□□ -0.78
AL355297.3-201ENST00000604082 PCDH10Q9P2E7 1040 aa10.19□□□□□ -0.78
AL355297.3-201ENST00000604082 CLEC11AQ9Y240 323 aa10.15□□□□□ -0.78
AL355297.3-201ENST00000604082 SPDYE1Q8NFV5 336 aaPredicted RBP10.14□□□□□ -0.79
AL355297.3-201ENST00000604082 EHMT2Q96KQ7 1210 aa10.11□□□□□ -0.79
AL355297.3-201ENST00000604082 PABPN1Q86U42 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
AL355297.3-201ENST00000604082 OTUD5Q96G74 571 aa10.07□□□□□ -0.8
AL355297.3-201ENST00000604082 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
AL355297.3-201ENST00000604082 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
AL355297.3-201ENST00000604082 CLCN6P51797 869 aa9.92□□□□□ -0.82
AL355297.3-201ENST00000604082 DCBLD2Q96PD2 775 aa9.92□□□□□ -0.82
AL355297.3-201ENST00000604082 POTEB2H3BUK9 544 aa9.87□□□□□ -0.83
AL355297.3-201ENST00000604082 FARP1Q9Y4F1 1045 aaPredicted RBP9.81□□□□□ -0.84
AL355297.3-201ENST00000604082 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
AL355297.3-201ENST00000604082 CD44P16070 742 aaKnown RBP9.8□□□□□ -0.84
AL355297.3-201ENST00000604082 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
AL355297.3-201ENST00000604082 CREBZFQ9NS37 354 aa9.75□□□□□ -0.85
AL355297.3-201ENST00000604082 STAG3Q9UJ98 1225 aa9.69□□□□□ -0.86
AL355297.3-201ENST00000604082 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
AL355297.3-201ENST00000604082 FAM163AQ96GL9 167 aaPredicted RBP9.63□□□□□ -0.87
AL355297.3-201ENST00000604082 ZRANB1Q9UGI0 708 aa9.62□□□□□ -0.87
AL355297.3-201ENST00000604082 MNX1P50219 401 aaPredicted RBP9.59□□□□□ -0.87
AL355297.3-201ENST00000604082 CDAN1Q8IWY9 1227 aa9.59□□□□□ -0.87
AL355297.3-201ENST00000604082 GALR2O43603 387 aaPredicted RBP9.57□□□□□ -0.88
AL355297.3-201ENST00000604082 PROM2Q8N271 834 aa9.57□□□□□ -0.88
AL355297.3-201ENST00000604082 POTEJP0CG39 1038 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms