Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL137790.1-201ENST00000634283 177 ntBASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 PTPRE-202ENST00000306042 4957 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 AC079753.1-201ENST00000623243 3868 ntBASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KRTAP3-3Q9BYR6 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 PARP4P2-201ENST00000446672 3326 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AC020658.3-201ENST00000568093 4028 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 RN7SKP113-201ENST00000363891 295 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 MIR146B-201ENST00000365699 73 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 SNORA80E-201ENST00000384744 137 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AC021016.1-201ENST00000414167 498 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 TRMT112P4-201ENST00000429016 379 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AC010967.3-201ENST00000438648 213 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AC025750.2-201ENST00000442609 450 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AC083939.1-201ENST00000445475 126 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 RN7SL757P-201ENST00000466709 301 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 RN7SL236P-201ENST00000484759 284 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 SNORA18.5-201ENST00000516616 101 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 IGLV3-13-201ENST00000518475 223 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 RPL10P9-201ENST00000522551 645 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 LINC02439-201ENST00000538783 450 ntTSL 3 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 CYCSP38-201ENST00000559840 322 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AC007225.2-201ENST00000562529 256 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 RN7SL208P-201ENST00000577964 296 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 MIR4440-201ENST00000583986 98 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 MIR2467-201ENST00000584559 81 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AL358335.3-201ENST00000604678 327 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AL355333.1-201ENST00000605632 279 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 RNA5SP108-201ENST00000605921 117 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 MIR8075-201ENST00000614354 80 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 AL442644.1-201ENST00000454390 3105 ntBASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KRTAP3-3Q9BYR6 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC007656.2-201ENST00000624902 4547 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms