Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 TSPY23P-201ENST00000440136 739 ntBASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 C2orf69P3-201ENST00000565542 1120 ntBASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SNX9Q9Y5X1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 PRSS44-201ENST00000515154 1146 ntBASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 AC012306.2-201ENST00000609350 630 ntBASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 AC097493.4-201ENST00000641197 219 ntBASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNX9Q9Y5X1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 LINC01568-207ENST00000641790 1380 ntBASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 TSPY21P-201ENST00000433481 731 ntBASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.48■□□□□ 0.87
SNX9Q9Y5X1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 AC145285.6-201ENST00000604632 637 ntBASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNX9Q9Y5X1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms