Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 AC008894.3-201ENST00000624324 3103 ntBASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAPPC1Q9Y5R8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 SMUG1P1-201ENST00000590640 811 ntBASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 AC134043.2-201ENST00000624206 2238 ntBASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAPPC1Q9Y5R8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 TEX21P-204ENST00000641479 1693 ntBASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 AP001271.2-201ENST00000624018 1556 ntBASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 AC012317.2-201ENST00000623305 2251 ntBASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAPPC1Q9Y5R8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAPPC1Q9Y5R8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAPPC1Q9Y5R8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC1Q9Y5R8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC1Q9Y5R8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC1Q9Y5R8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC1Q9Y5R8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC1Q9Y5R8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAPPC1Q9Y5R8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAPPC1Q9Y5R8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms