Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGB1Q9Y5G3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB1Q9Y5G3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 CDCA4P2-201ENST00000441182 718 ntBASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 AC073111.5-205ENST00000641717 521 ntBASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB1Q9Y5G3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 AC023632.3-201ENST00000521633 145 ntBASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 AC105020.6-201ENST00000621523 1217 ntBASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGB1Q9Y5G3 AC020763.4-201ENST00000623414 4170 ntBASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms