Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 AC091076.1-201ENST00000610741 619 ntBASIC20.02■□□□□ 0.8
YIPF1Q9Y548 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
YIPF1Q9Y548 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.02■□□□□ 0.79
YIPF1Q9Y548 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
YIPF1Q9Y548 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
YIPF1Q9Y548 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
YIPF1Q9Y548 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 KRT18P38-201ENST00000449496 1282 ntBASIC20.01■□□□□ 0.79
YIPF1Q9Y548 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 NEK4P2-201ENST00000580004 1012 ntBASIC20.01■□□□□ 0.79
YIPF1Q9Y548 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.01■□□□□ 0.79
YIPF1Q9Y548 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20■□□□□ 0.79
YIPF1Q9Y548 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20■□□□□ 0.79
YIPF1Q9Y548 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20■□□□□ 0.79
YIPF1Q9Y548 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20■□□□□ 0.79
YIPF1Q9Y548 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20■□□□□ 0.79
YIPF1Q9Y548 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20■□□□□ 0.79
YIPF1Q9Y548 UPK3BP1-201ENST00000428678 509 ntBASIC20■□□□□ 0.79
YIPF1Q9Y548 AL671277.2-201ENST00000458060 996 ntBASIC20■□□□□ 0.79
YIPF1Q9Y548 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
YIPF1Q9Y548 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20■□□□□ 0.79
YIPF1Q9Y548 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20■□□□□ 0.79
YIPF1Q9Y548 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20■□□□□ 0.79
YIPF1Q9Y548 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20■□□□□ 0.79
YIPF1Q9Y548 CR769767.2-201ENST00000622735 460 ntBASIC20■□□□□ 0.79
YIPF1Q9Y548 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20■□□□□ 0.79
YIPF1Q9Y548 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20■□□□□ 0.79
YIPF1Q9Y548 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
YIPF1Q9Y548 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20■□□□□ 0.79
YIPF1Q9Y548 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.99■□□□□ 0.79
YIPF1Q9Y548 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 AL121956.5-201ENST00000625261 221 ntBASIC19.99■□□□□ 0.79
YIPF1Q9Y548 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.99■□□□□ 0.79
YIPF1Q9Y548 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.99■□□□□ 0.79
YIPF1Q9Y548 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
YIPF1Q9Y548 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms