Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC093525.10-201ENST00000625130 1569 ntBASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 AP005212.1-201ENST00000581547 1997 ntBASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 AC079602.3-201ENST00000623931 403 ntBASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 AC009078.2-202ENST00000463353 338 ntBASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.16■■□□□ 1.46
RTCBQ9Y3I0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 AL023284.2-201ENST00000405850 579 ntBASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 EMBP1-201ENST00000458200 901 ntBASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTCBQ9Y3I0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RTCBQ9Y3I0 KRT18P1-202ENST00000452408 1331 ntBASIC24.14■■□□□ 1.46
RTCBQ9Y3I0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RTCBQ9Y3I0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.14■■□□□ 1.46
RTCBQ9Y3I0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
RTCBQ9Y3I0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 TSPY19P-201ENST00000418461 509 ntBASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 HLA-F-220ENST00000434407 884 ntBASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 TSPY18P-201ENST00000441642 509 ntBASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.14■■□□□ 1.45
RTCBQ9Y3I0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 SEC1P-202ENST00000473944 940 ntBASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 AL732292.2-201ENST00000609649 430 ntBASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 AL031008.1-201ENST00000619963 541 ntBASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RTCBQ9Y3I0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.12■■□□□ 1.45
RTCBQ9Y3I0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms