Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HHLA3Q9XRX5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14□□□□□ -0.17
HHLA3Q9XRX5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HHLA3Q9XRX5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HHLA3Q9XRX5 AP001271.2-201ENST00000624018 1556 ntBASIC14□□□□□ -0.17
HHLA3Q9XRX5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HHLA3Q9XRX5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
HHLA3Q9XRX5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14□□□□□ -0.17
HHLA3Q9XRX5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HHLA3Q9XRX5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14□□□□□ -0.17
HHLA3Q9XRX5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 AC098934.4-201ENST00000564127 592 ntBASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HHLA3Q9XRX5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 AC083880.1-201ENST00000608266 535 ntBASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 AC006557.6-201ENST00000623071 864 ntBASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HHLA3Q9XRX5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 AC009237.14-201ENST00000609975 1594 ntBASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.97□□□□□ -0.17
HHLA3Q9XRX5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms