Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 KRT18P57-201ENST00000443599 1254 ntBASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 AP000692.2-201ENST00000608391 879 ntBASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 AC130371.2-201ENST00000619443 611 ntBASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXD3Q9UJU5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 AC011506.1-201ENST00000474329 610 ntBASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 LINC01238-205ENST00000567549 1107 ntBASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXD3Q9UJU5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 AC004951.3-201ENST00000418645 1148 ntBASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXD3Q9UJU5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 CCR12P-201ENST00000446203 998 ntBASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 DUX4L26-201ENST00000489078 1255 ntBASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 SLC25A1P4-201ENST00000567977 778 ntBASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 AC011298.2-201ENST00000617989 482 ntBASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 AL032819.2-201ENST00000624543 2162 ntBASIC17.11■□□□□ 0.33
FOXD3Q9UJU5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 SDHAP1-207ENST00000440850 2000 ntBASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXD3Q9UJU5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms