Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBP1Q9NZI7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 GCSHP5-201ENST00000443090 522 ntBASIC19.49■□□□□ 0.71
UBP1Q9NZI7 AP002982.1-201ENST00000492365 877 ntBASIC19.49■□□□□ 0.71
UBP1Q9NZI7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBP1Q9NZI7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 AC004408.2-201ENST00000623613 2777 ntBASIC19.48■□□□□ 0.71
UBP1Q9NZI7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 NIFKP9-201ENST00000419265 221 ntBASIC19.48■□□□□ 0.71
UBP1Q9NZI7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
UBP1Q9NZI7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
UBP1Q9NZI7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms