Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDHB16Q9NRJ7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 TFP1-202ENST00000475455 1573 ntBASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 CDCA4P2-201ENST00000441182 718 ntBASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 AC006970.2-201ENST00000450065 779 ntBASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 AC105036.2-201ENST00000569468 176 ntBASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDHB16Q9NRJ7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 AC005829.2-201ENST00000571422 1056 ntBASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 PKD1P1-201ENST00000458669 6805 ntBASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHB16Q9NRJ7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 BX276092.2-201ENST00000417668 665 ntBASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms