Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEUROD4Q9HD90 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.08■□□□□ 0.48
NEUROD4Q9HD90 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NEUROD4Q9HD90 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEUROD4Q9HD90 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NEUROD4Q9HD90 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 AL049812.1-201ENST00000432563 2267 ntBASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEUROD4Q9HD90 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 GCSHP5-201ENST00000443090 522 ntBASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 MTDHP1-201ENST00000605323 784 ntBASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 IRX1P1-201ENST00000438849 1838 ntBASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEUROD4Q9HD90 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 AL158047.1-201ENST00000445918 881 ntBASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 AC142381.4-202ENST00000563973 229 ntBASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 AC006333.2-201ENST00000607957 2099 ntBASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEUROD4Q9HD90 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms