Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC124283.5-201ENST00000624661 1809 ntBASIC21.39■■□□□ 1.02
CBX8Q9HC52 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBX8Q9HC52 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBX8Q9HC52 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
CBX8Q9HC52 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBX8Q9HC52 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.39■■□□□ 1.01
CBX8Q9HC52 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CBX8Q9HC52 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBX8Q9HC52 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.39■■□□□ 1.01
CBX8Q9HC52 AC016769.1-201ENST00000409132 1010 ntBASIC21.39■■□□□ 1.01
CBX8Q9HC52 AL512625.2-201ENST00000417533 625 ntBASIC21.39■■□□□ 1.01
CBX8Q9HC52 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.39■■□□□ 1.01
CBX8Q9HC52 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.39■■□□□ 1.01
CBX8Q9HC52 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBX8Q9HC52 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBX8Q9HC52 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CBX8Q9HC52 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CBX8Q9HC52 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
CBX8Q9HC52 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 ABALON-201ENST00000629058 1903 ntBASIC21.38■■□□□ 1.01
CBX8Q9HC52 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 AC007322.1-201ENST00000426983 750 ntBASIC21.38■■□□□ 1.01
CBX8Q9HC52 AC006015.1-201ENST00000429970 570 ntBASIC21.38■■□□□ 1.01
CBX8Q9HC52 AC083906.6-201ENST00000641366 219 ntBASIC21.38■■□□□ 1.01
CBX8Q9HC52 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.38■■□□□ 1.01
CBX8Q9HC52 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CBX8Q9HC52 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 AC231657.2-201ENST00000624556 255 ntBASIC21.37■■□□□ 1.01
CBX8Q9HC52 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 KRT8P8-201ENST00000434750 1448 ntBASIC21.37■■□□□ 1.01
CBX8Q9HC52 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CBX8Q9HC52 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CBX8Q9HC52 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 LSM12P1-201ENST00000411836 588 ntBASIC21.36■■□□□ 1.01
CBX8Q9HC52 KRT18P5-201ENST00000436075 1291 ntBASIC21.36■■□□□ 1.01
CBX8Q9HC52 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.36■■□□□ 1.01
CBX8Q9HC52 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CBX8Q9HC52 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms