Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 MIR4651-201ENST00000582622 73 ntBASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 POU5F1P3-201ENST00000428824 1078 ntBASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 AC128676.1-201ENST00000454392 318 ntBASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC40Q9H9A6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 TSPY21P-201ENST00000433481 731 ntBASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC40Q9H9A6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 FEM1AP3-201ENST00000403722 1741 ntBASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRC40Q9H9A6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms