Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PIF1Q9H611 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PIF1Q9H611 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.29■□□□□ 0.52
PIF1Q9H611 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PIF1Q9H611 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.28■□□□□ 0.52
PIF1Q9H611 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.28■□□□□ 0.52
PIF1Q9H611 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PIF1Q9H611 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PIF1Q9H611 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.28■□□□□ 0.52
PIF1Q9H611 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PIF1Q9H611 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.28■□□□□ 0.52
PIF1Q9H611 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.28■□□□□ 0.52
PIF1Q9H611 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PIF1Q9H611 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PIF1Q9H611 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PIF1Q9H611 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.28■□□□□ 0.52
PIF1Q9H611 LSM12P1-201ENST00000411836 588 ntBASIC18.28■□□□□ 0.52
PIF1Q9H611 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.28■□□□□ 0.52
PIF1Q9H611 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.28■□□□□ 0.52
PIF1Q9H611 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.28■□□□□ 0.52
PIF1Q9H611 TFP1-202ENST00000475455 1573 ntBASIC18.28■□□□□ 0.52
PIF1Q9H611 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PIF1Q9H611 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PIF1Q9H611 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PIF1Q9H611 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.28■□□□□ 0.52
PIF1Q9H611 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PIF1Q9H611 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
PIF1Q9H611 AL133373.2-201ENST00000623187 2828 ntBASIC18.27■□□□□ 0.52
PIF1Q9H611 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.27■□□□□ 0.52
PIF1Q9H611 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.27■□□□□ 0.52
PIF1Q9H611 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.27■□□□□ 0.52
PIF1Q9H611 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 GPX1P1-201ENST00000388829 606 ntBASIC18.27■□□□□ 0.52
PIF1Q9H611 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PIF1Q9H611 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.27■□□□□ 0.52
PIF1Q9H611 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.27■□□□□ 0.52
PIF1Q9H611 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PIF1Q9H611 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PIF1Q9H611 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.27■□□□□ 0.52
PIF1Q9H611 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.51
PIF1Q9H611 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PIF1Q9H611 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PIF1Q9H611 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PIF1Q9H611 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PIF1Q9H611 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PIF1Q9H611 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.27■□□□□ 0.51
PIF1Q9H611 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PIF1Q9H611 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.27■□□□□ 0.51
PIF1Q9H611 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PIF1Q9H611 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.27■□□□□ 0.51
PIF1Q9H611 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.26■□□□□ 0.51
PIF1Q9H611 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.26■□□□□ 0.51
PIF1Q9H611 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.26■□□□□ 0.51
PIF1Q9H611 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.26■□□□□ 0.51
PIF1Q9H611 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PIF1Q9H611 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PIF1Q9H611 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.26■□□□□ 0.51
PIF1Q9H611 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.26■□□□□ 0.51
PIF1Q9H611 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.26■□□□□ 0.51
PIF1Q9H611 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.26■□□□□ 0.51
PIF1Q9H611 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.26■□□□□ 0.51
PIF1Q9H611 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
PIF1Q9H611 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.26■□□□□ 0.51
PIF1Q9H611 SDHAP1-207ENST00000440850 2000 ntBASIC18.26■□□□□ 0.51
PIF1Q9H611 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.26■□□□□ 0.51
PIF1Q9H611 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PIF1Q9H611 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PIF1Q9H611 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.25■□□□□ 0.51
PIF1Q9H611 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.25■□□□□ 0.51
PIF1Q9H611 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms