Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUCKS1Q9H1E3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 PRORSD1P-201ENST00000295112 541 ntBASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 AC008687.6-201ENST00000596318 630 ntBASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 AC073648.6-201ENST00000641589 218 ntBASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 FEM1AP3-201ENST00000403722 1741 ntBASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
NUCKS1Q9H1E3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 AC233263.1-201ENST00000578059 224 ntBASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUCKS1Q9H1E3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NUCKS1Q9H1E3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
NUCKS1Q9H1E3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms