Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 AC003102.1-202ENST00000563394 1796 ntBASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
CYSTM1Q9H1C7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
CYSTM1Q9H1C7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CYSTM1Q9H1C7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 AC099063.4-201ENST00000641099 1602 ntBASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 HLA-V-202ENST00000446817 847 ntBASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
CYSTM1Q9H1C7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms