Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.71■□□□□ 0.42
POLR2J3Q9H1A7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
POLR2J3Q9H1A7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
POLR2J3Q9H1A7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR2J3Q9H1A7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 TUBB8P6-201ENST00000436895 1288 ntBASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
POLR2J3Q9H1A7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 AC104581.1-202ENST00000635932 2618 ntBASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 AC007613.1-201ENST00000572811 2597 ntBASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR2J3Q9H1A7 BCL2-203ENST00000589955 5011 ntBASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR2J3Q9H1A7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms