Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 SLC25A6P5-201ENST00000435663 894 ntBASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 CDV3P1-201ENST00000471403 739 ntBASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.86■□□□□ 0.29
SLIRPQ9GZT3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 AC079140.4-201ENST00000507448 529 ntBASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 TSPY26P-201ENST00000476365 1326 ntBASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 SDHAP1-207ENST00000440850 2000 ntBASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 AD000864.1-201ENST00000624076 2295 ntBASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLIRPQ9GZT3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 MIR4466-201ENST00000606121 54 ntBASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLIRPQ9GZT3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms