Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.42■□□□□ 0.7
PHACTR1Q9C0D0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 AC092666.2-201ENST00000613287 246 ntBASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 MYC-209ENST00000641252 345 ntBASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PHACTR1Q9C0D0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 AC120498.9-201ENST00000339021 3867 ntBASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 AC092368.3-202ENST00000574180 1591 ntBASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHACTR1Q9C0D0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PHACTR1Q9C0D0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.39■□□□□ 0.7
PHACTR1Q9C0D0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PHACTR1Q9C0D0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHACTR1Q9C0D0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHACTR1Q9C0D0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PHACTR1Q9C0D0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
PHACTR1Q9C0D0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 AC060766.5-201ENST00000590539 871 ntBASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 AL121832.2-201ENST00000610979 668 ntBASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHACTR1Q9C0D0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms