Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRIM7Q9C029 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM7Q9C029 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM7Q9C029 TUBB8P6-201ENST00000436895 1288 ntBASIC20.33■□□□□ 0.85
TRIM7Q9C029 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.33■□□□□ 0.85
TRIM7Q9C029 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM7Q9C029 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM7Q9C029 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM7Q9C029 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM7Q9C029 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TRIM7Q9C029 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM7Q9C029 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM7Q9C029 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM7Q9C029 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM7Q9C029 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM7Q9C029 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
TRIM7Q9C029 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM7Q9C029 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM7Q9C029 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM7Q9C029 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM7Q9C029 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM7Q9C029 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM7Q9C029 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM7Q9C029 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM7Q9C029 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 ESRRAP1-201ENST00000400596 1257 ntBASIC20.31■□□□□ 0.84
TRIM7Q9C029 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM7Q9C029 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 MIR4651-201ENST00000582622 73 ntBASIC20.31■□□□□ 0.84
TRIM7Q9C029 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM7Q9C029 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM7Q9C029 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM7Q9C029 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM7Q9C029 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRIM7Q9C029 NBPF21P-201ENST00000425093 1451 ntBASIC20.3■□□□□ 0.84
TRIM7Q9C029 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM7Q9C029 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM7Q9C029 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM7Q9C029 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM7Q9C029 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM7Q9C029 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms