Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
VRK1Q99986 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.88■□□□□ 0.29
VRK1Q99986 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
VRK1Q99986 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 AC005332.7-201ENST00000614046 2005 ntBASIC16.88■□□□□ 0.29
VRK1Q99986 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
VRK1Q99986 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.88■□□□□ 0.29
VRK1Q99986 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VRK1Q99986 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VRK1Q99986 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VRK1Q99986 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.88■□□□□ 0.29
VRK1Q99986 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VRK1Q99986 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VRK1Q99986 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK1Q99986 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.87■□□□□ 0.29
VRK1Q99986 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.87■□□□□ 0.29
VRK1Q99986 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.87■□□□□ 0.29
VRK1Q99986 MIR4785-201ENST00000585005 73 ntBASIC16.87■□□□□ 0.29
VRK1Q99986 AC113410.3-201ENST00000623366 203 ntBASIC16.87■□□□□ 0.29
VRK1Q99986 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
VRK1Q99986 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.87■□□□□ 0.29
VRK1Q99986 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VRK1Q99986 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
VRK1Q99986 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.86■□□□□ 0.29
VRK1Q99986 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
VRK1Q99986 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.86■□□□□ 0.29
VRK1Q99986 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 AC093503.3-201ENST00000624917 2352 ntBASIC16.86■□□□□ 0.29
VRK1Q99986 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VRK1Q99986 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.86■□□□□ 0.29
VRK1Q99986 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VRK1Q99986 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VRK1Q99986 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.86■□□□□ 0.29
VRK1Q99986 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.86■□□□□ 0.29
VRK1Q99986 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
VRK1Q99986 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.86■□□□□ 0.29
VRK1Q99986 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.86■□□□□ 0.29
VRK1Q99986 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.86■□□□□ 0.29
VRK1Q99986 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.86■□□□□ 0.29
VRK1Q99986 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
VRK1Q99986 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
VRK1Q99986 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.86■□□□□ 0.29
VRK1Q99986 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.86■□□□□ 0.29
VRK1Q99986 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK1Q99986 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK1Q99986 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms