Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
RNF5Q99942 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RNF5Q99942 AC004951.3-201ENST00000418645 1148 ntBASIC15.31■□□□□ 0.04
RNF5Q99942 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF5Q99942 TSPY23P-201ENST00000440136 739 ntBASIC15.31■□□□□ 0.04
RNF5Q99942 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF5Q99942 RPS2P4-201ENST00000476944 856 ntBASIC15.31■□□□□ 0.04
RNF5Q99942 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF5Q99942 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF5Q99942 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF5Q99942 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF5Q99942 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF5Q99942 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF5Q99942 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF5Q99942 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF5Q99942 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF5Q99942 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF5Q99942 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF5Q99942 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
RNF5Q99942 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF5Q99942 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF5Q99942 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF5Q99942 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.3■□□□□ 0.04
RNF5Q99942 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RNF5Q99942 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF5Q99942 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF5Q99942 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF5Q99942 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 PRORSD1P-201ENST00000295112 541 ntBASIC15.29■□□□□ 0.04
RNF5Q99942 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF5Q99942 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF5Q99942 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF5Q99942 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF5Q99942 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF5Q99942 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF5Q99942 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF5Q99942 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 CR392000.1-201ENST00000624770 1228 ntBASIC15.29■□□□□ 0.04
RNF5Q99942 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF5Q99942 AP000974.1-201ENST00000623909 2387 ntBASIC15.29■□□□□ 0.04
RNF5Q99942 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF5Q99942 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF5Q99942 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF5Q99942 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF5Q99942 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF5Q99942 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF5Q99942 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RNF5Q99942 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF5Q99942 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 GCSHP5-201ENST00000443090 522 ntBASIC15.28■□□□□ 0.04
RNF5Q99942 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF5Q99942 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF5Q99942 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF5Q99942 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms