Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.53■□□□□ 0.24
GFI1Q99684 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.53■□□□□ 0.24
GFI1Q99684 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.53■□□□□ 0.24
GFI1Q99684 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 LSM12P1-201ENST00000411836 588 ntBASIC16.53■□□□□ 0.24
GFI1Q99684 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.53■□□□□ 0.24
GFI1Q99684 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GFI1Q99684 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 AC005181.1-201ENST00000604782 1256 ntBASIC16.53■□□□□ 0.24
GFI1Q99684 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GFI1Q99684 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.53■□□□□ 0.24
GFI1Q99684 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GFI1Q99684 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GFI1Q99684 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GFI1Q99684 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.52■□□□□ 0.24
GFI1Q99684 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.52■□□□□ 0.24
GFI1Q99684 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFI1Q99684 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
GFI1Q99684 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
GFI1Q99684 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.52■□□□□ 0.24
GFI1Q99684 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFI1Q99684 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
GFI1Q99684 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.52■□□□□ 0.24
GFI1Q99684 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.52■□□□□ 0.24
GFI1Q99684 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFI1Q99684 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GFI1Q99684 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
GFI1Q99684 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.52■□□□□ 0.24
GFI1Q99684 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFI1Q99684 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GFI1Q99684 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GFI1Q99684 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GFI1Q99684 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GFI1Q99684 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
GFI1Q99684 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
GFI1Q99684 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GFI1Q99684 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GFI1Q99684 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
GFI1Q99684 AC073592.3-201ENST00000625118 1834 ntBASIC16.52■□□□□ 0.23
GFI1Q99684 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.51■□□□□ 0.23
GFI1Q99684 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.51■□□□□ 0.23
GFI1Q99684 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GFI1Q99684 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GFI1Q99684 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.51■□□□□ 0.23
GFI1Q99684 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.51■□□□□ 0.23
GFI1Q99684 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
GFI1Q99684 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.51■□□□□ 0.23
GFI1Q99684 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
GFI1Q99684 AC020916.1-201ENST00000587762 1774 ntBASIC16.51■□□□□ 0.23
GFI1Q99684 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GFI1Q99684 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.51■□□□□ 0.23
GFI1Q99684 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GFI1Q99684 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.5■□□□□ 0.23
GFI1Q99684 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.5■□□□□ 0.23
GFI1Q99684 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.5■□□□□ 0.23
GFI1Q99684 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.5■□□□□ 0.23
GFI1Q99684 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.5■□□□□ 0.23
GFI1Q99684 YBX1P10-201ENST00000444752 975 ntBASIC16.5■□□□□ 0.23
GFI1Q99684 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GFI1Q99684 MIR6821-201ENST00000617625 74 ntBASIC16.5■□□□□ 0.23
GFI1Q99684 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 AC008764.6-201ENST00000595909 2069 ntBASIC16.5■□□□□ 0.23
GFI1Q99684 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
GFI1Q99684 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GFI1Q99684 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms