Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 LIN28AP1-201ENST00000429574 405 ntBASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 AC007663.1-201ENST00000438948 1240 ntBASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 ECEL1P2-202ENST00000465689 757 ntBASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 FAM87A-204ENST00000613235 858 ntBASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 AC092865.7-201ENST00000641832 219 ntBASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP1Q96SZ6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 RCN1P1-201ENST00000400413 996 ntBASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP1Q96SZ6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 ATP5G1P1-201ENST00000448724 379 ntBASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP1Q96SZ6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 TERF1P1-201ENST00000311003 1181 ntBASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 AC005521.1-201ENST00000393351 872 ntBASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms