Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 AC124016.1-201ENST00000609552 612 ntBASIC18.09■□□□□ 0.49
COL21A1Q96P44 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL21A1Q96P44 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL21A1Q96P44 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL21A1Q96P44 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
COL21A1Q96P44 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
COL21A1Q96P44 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL21A1Q96P44 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 AC133681.1-201ENST00000465482 601 ntBASIC18.08■□□□□ 0.48
COL21A1Q96P44 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL21A1Q96P44 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.08■□□□□ 0.48
COL21A1Q96P44 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 AC142381.4-202ENST00000563973 229 ntBASIC18.07■□□□□ 0.48
COL21A1Q96P44 AC004264.1-201ENST00000608354 794 ntBASIC18.07■□□□□ 0.48
COL21A1Q96P44 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.07■□□□□ 0.48
COL21A1Q96P44 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL21A1Q96P44 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.06■□□□□ 0.48
COL21A1Q96P44 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 AC098590.1-201ENST00000468126 897 ntBASIC18.06■□□□□ 0.48
COL21A1Q96P44 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 AC110285.5-201ENST00000611501 352 ntBASIC18.06■□□□□ 0.48
COL21A1Q96P44 AL359736.2-201ENST00000621992 437 ntBASIC18.06■□□□□ 0.48
COL21A1Q96P44 FAM197Y4-202ENST00000622692 608 ntBASIC18.06■□□□□ 0.48
COL21A1Q96P44 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.06■□□□□ 0.48
COL21A1Q96P44 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms