Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VPS50Q96JG6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.72■□□□□ 0.59
VPS50Q96JG6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS50Q96JG6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS50Q96JG6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS50Q96JG6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS50Q96JG6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VPS50Q96JG6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS50Q96JG6 KRT8P20-201ENST00000423953 1409 ntBASIC18.72■□□□□ 0.59
VPS50Q96JG6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS50Q96JG6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
VPS50Q96JG6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS50Q96JG6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.71■□□□□ 0.59
VPS50Q96JG6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VPS50Q96JG6 KRT17P2-201ENST00000300992 1314 ntBASIC18.71■□□□□ 0.59
VPS50Q96JG6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS50Q96JG6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS50Q96JG6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS50Q96JG6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS50Q96JG6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS50Q96JG6 MIR4497-201ENST00000583208 89 ntBASIC18.7■□□□□ 0.58
VPS50Q96JG6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS50Q96JG6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS50Q96JG6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS50Q96JG6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS50Q96JG6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 RARRES2P10-201ENST00000564312 460 ntBASIC18.69■□□□□ 0.58
VPS50Q96JG6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 AL031963.3-201ENST00000606441 850 ntBASIC18.69■□□□□ 0.58
VPS50Q96JG6 AC004264.1-201ENST00000608354 794 ntBASIC18.69■□□□□ 0.58
VPS50Q96JG6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VPS50Q96JG6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS50Q96JG6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS50Q96JG6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS50Q96JG6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 AL596275.1-201ENST00000423464 877 ntBASIC18.68■□□□□ 0.58
VPS50Q96JG6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
VPS50Q96JG6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms