Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ITCHQ96J02 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.23■□□□□ 0.51
ITCHQ96J02 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ITCHQ96J02 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.23■□□□□ 0.51
ITCHQ96J02 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.23■□□□□ 0.51
ITCHQ96J02 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 AC005082.1-201ENST00000413042 2259 ntBASIC18.23■□□□□ 0.51
ITCHQ96J02 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.23■□□□□ 0.51
ITCHQ96J02 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ITCHQ96J02 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.23■□□□□ 0.51
ITCHQ96J02 AC006970.2-201ENST00000450065 779 ntBASIC18.23■□□□□ 0.51
ITCHQ96J02 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.23■□□□□ 0.51
ITCHQ96J02 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ITCHQ96J02 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.23■□□□□ 0.51
ITCHQ96J02 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ITCHQ96J02 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.23■□□□□ 0.51
ITCHQ96J02 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ITCHQ96J02 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
ITCHQ96J02 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ITCHQ96J02 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ITCHQ96J02 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ITCHQ96J02 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.22■□□□□ 0.51
ITCHQ96J02 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ITCHQ96J02 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.22■□□□□ 0.51
ITCHQ96J02 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 SLC29A4P1-201ENST00000398760 971 ntBASIC18.22■□□□□ 0.51
ITCHQ96J02 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.22■□□□□ 0.51
ITCHQ96J02 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.22■□□□□ 0.51
ITCHQ96J02 KRT18P16-201ENST00000510337 1294 ntBASIC18.22■□□□□ 0.51
ITCHQ96J02 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.22■□□□□ 0.51
ITCHQ96J02 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.22■□□□□ 0.51
ITCHQ96J02 HLA-B-256ENST00000639848 1089 ntBASIC18.22■□□□□ 0.51
ITCHQ96J02 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ITCHQ96J02 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.22■□□□□ 0.51
ITCHQ96J02 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ITCHQ96J02 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.22■□□□□ 0.51
ITCHQ96J02 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ITCHQ96J02 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.21■□□□□ 0.51
ITCHQ96J02 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.21■□□□□ 0.51
ITCHQ96J02 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.21■□□□□ 0.51
ITCHQ96J02 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.21■□□□□ 0.51
ITCHQ96J02 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.21■□□□□ 0.51
ITCHQ96J02 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.21■□□□□ 0.51
ITCHQ96J02 MIR4758-201ENST00000577688 71 ntBASIC18.21■□□□□ 0.51
ITCHQ96J02 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.21■□□□□ 0.51
ITCHQ96J02 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.21■□□□□ 0.51
ITCHQ96J02 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ITCHQ96J02 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ITCHQ96J02 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.21■□□□□ 0.51
ITCHQ96J02 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
ITCHQ96J02 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.21■□□□□ 0.51
ITCHQ96J02 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ITCHQ96J02 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.21■□□□□ 0.51
ITCHQ96J02 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
ITCHQ96J02 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 AC104581.1-202ENST00000635932 2618 ntBASIC18.2■□□□□ 0.5
ITCHQ96J02 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ITCHQ96J02 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.2■□□□□ 0.5
ITCHQ96J02 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ITCHQ96J02 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms