Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SHDQ96IW2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SHDQ96IW2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHDQ96IW2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
SHDQ96IW2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHDQ96IW2 AL022342.1-201ENST00000400363 863 ntBASIC19.34■□□□□ 0.69
SHDQ96IW2 EMBP1-201ENST00000458200 901 ntBASIC19.34■□□□□ 0.69
SHDQ96IW2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHDQ96IW2 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.34■□□□□ 0.69
SHDQ96IW2 AC023511.2-201ENST00000618803 211 ntBASIC19.34■□□□□ 0.69
SHDQ96IW2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHDQ96IW2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHDQ96IW2 AC009237.14-201ENST00000609975 1594 ntBASIC19.34■□□□□ 0.69
SHDQ96IW2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.34■□□□□ 0.69
SHDQ96IW2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHDQ96IW2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHDQ96IW2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SHDQ96IW2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.34■□□□□ 0.69
SHDQ96IW2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.34■□□□□ 0.69
SHDQ96IW2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHDQ96IW2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.33■□□□□ 0.69
SHDQ96IW2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.33■□□□□ 0.69
SHDQ96IW2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SHDQ96IW2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHDQ96IW2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHDQ96IW2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHDQ96IW2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.33■□□□□ 0.68
SHDQ96IW2 TSPY22P-201ENST00000427496 604 ntBASIC19.33■□□□□ 0.68
SHDQ96IW2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.33■□□□□ 0.68
SHDQ96IW2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHDQ96IW2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.33■□□□□ 0.68
SHDQ96IW2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SHDQ96IW2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SHDQ96IW2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.33■□□□□ 0.68
SHDQ96IW2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHDQ96IW2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SHDQ96IW2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHDQ96IW2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.33■□□□□ 0.68
SHDQ96IW2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.33■□□□□ 0.68
SHDQ96IW2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHDQ96IW2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SHDQ96IW2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
SHDQ96IW2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHDQ96IW2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHDQ96IW2 AC009078.2-202ENST00000463353 338 ntBASIC19.32■□□□□ 0.68
SHDQ96IW2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.32■□□□□ 0.68
SHDQ96IW2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SHDQ96IW2 AL031008.1-201ENST00000619963 541 ntBASIC19.32■□□□□ 0.68
SHDQ96IW2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.32■□□□□ 0.68
SHDQ96IW2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SHDQ96IW2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHDQ96IW2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.32■□□□□ 0.68
SHDQ96IW2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHDQ96IW2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHDQ96IW2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.32■□□□□ 0.68
SHDQ96IW2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.32■□□□□ 0.68
SHDQ96IW2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.32■□□□□ 0.68
SHDQ96IW2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.31■□□□□ 0.68
SHDQ96IW2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SHDQ96IW2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SHDQ96IW2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SHDQ96IW2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
SHDQ96IW2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.31■□□□□ 0.68
SHDQ96IW2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.31■□□□□ 0.68
SHDQ96IW2 HLA-F-220ENST00000434407 884 ntBASIC19.31■□□□□ 0.68
SHDQ96IW2 DRAXINP1-201ENST00000437611 948 ntBASIC19.31■□□□□ 0.68
SHDQ96IW2 AP000867.3-201ENST00000524675 377 ntBASIC19.31■□□□□ 0.68
SHDQ96IW2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.31■□□□□ 0.68
SHDQ96IW2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.31■□□□□ 0.68
SHDQ96IW2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SHDQ96IW2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.31■□□□□ 0.68
SHDQ96IW2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SHDQ96IW2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 EP400NL-214ENST00000641289 2402 ntBASIC19.31■□□□□ 0.68
SHDQ96IW2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHDQ96IW2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.3■□□□□ 0.68
SHDQ96IW2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHDQ96IW2 MIR662-201ENST00000384847 95 ntBASIC19.3■□□□□ 0.68
SHDQ96IW2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms