Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 AC100791.3-201ENST00000617619 330 ntBASIC18.84■□□□□ 0.61
SPDL1Q96EA4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.84■□□□□ 0.61
SPDL1Q96EA4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.83■□□□□ 0.61
SPDL1Q96EA4 PHGDH-210ENST00000641115 1638 ntBASIC18.83■□□□□ 0.61
SPDL1Q96EA4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 HLA-G-202ENST00000376815 851 ntBASIC18.83■□□□□ 0.6
SPDL1Q96EA4 HLA-G-203ENST00000376818 1127 ntBASIC18.83■□□□□ 0.6
SPDL1Q96EA4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 AC105020.6-201ENST00000621523 1217 ntBASIC18.83■□□□□ 0.6
SPDL1Q96EA4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPDL1Q96EA4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 RARRES2P4-201ENST00000514074 484 ntBASIC18.82■□□□□ 0.6
SPDL1Q96EA4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 MFSD11-216ENST00000590393 1141 ntBASIC18.82■□□□□ 0.6
SPDL1Q96EA4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPDL1Q96EA4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms