Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 LINC01023-201ENST00000606054 436 ntBASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 AL023803.3-201ENST00000615559 522 ntBASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 AC007952.6-201ENST00000573168 2673 ntBASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 AC003957.1-201ENST00000625108 2673 ntBASIC19.18■□□□□ 0.66
ECHDC3Q96DC8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 ECEL1P3-201ENST00000427961 737 ntBASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 LINC01568-207ENST00000641790 1380 ntBASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ECHDC3Q96DC8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ECHDC3Q96DC8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 AC005332.7-201ENST00000614046 2005 ntBASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 AC092338.2-201ENST00000568827 1415 ntBASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC3Q96DC8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.14■□□□□ 0.66
ECHDC3Q96DC8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ECHDC3Q96DC8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ECHDC3Q96DC8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 KRT18P22-201ENST00000402024 1347 ntBASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms