Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC11Q96DB2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 ABHD17AP1-201ENST00000358206 933 ntBASIC19.69■□□□□ 0.74
HDAC11Q96DB2 AC098590.1-201ENST00000468126 897 ntBASIC19.69■□□□□ 0.74
HDAC11Q96DB2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 RARRES2P10-201ENST00000564312 460 ntBASIC19.69■□□□□ 0.74
HDAC11Q96DB2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC11Q96DB2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC11Q96DB2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 AL161938.1-201ENST00000569833 2180 ntBASIC19.67■□□□□ 0.74
HDAC11Q96DB2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC11Q96DB2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms