Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VPS33AQ96AX1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS33AQ96AX1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
VPS33AQ96AX1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
VPS33AQ96AX1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS33AQ96AX1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
VPS33AQ96AX1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.39■□□□□ 0.53
VPS33AQ96AX1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.39■□□□□ 0.53
VPS33AQ96AX1 AC073210.2-201ENST00000430369 194 ntBASIC18.39■□□□□ 0.53
VPS33AQ96AX1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 AC006557.6-201ENST00000623071 864 ntBASIC18.39■□□□□ 0.53
VPS33AQ96AX1 AC073111.5-205ENST00000641717 521 ntBASIC18.39■□□□□ 0.53
VPS33AQ96AX1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.39■□□□□ 0.53
VPS33AQ96AX1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS33AQ96AX1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS33AQ96AX1 IRX1P1-201ENST00000438849 1838 ntBASIC18.37■□□□□ 0.53
VPS33AQ96AX1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 AC080038.1-201ENST00000611274 1154 ntBASIC18.37■□□□□ 0.53
VPS33AQ96AX1 IKBKGP1-201ENST00000612193 1073 ntBASIC18.37■□□□□ 0.53
VPS33AQ96AX1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS33AQ96AX1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms